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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c12924_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		protein_TIS11_isoform_X2_[Bombyx_mori]
Ontology
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006402 P mRNA catabolic process
GO:0007275 P multicellular organism development
GO:0030097 P hemopoiesis
GO:0035019 P somatic stem cell population maintenance
GO:0035925 F mRNA 3'-UTR AU-rich region binding
GO:0043488 P regulation of mRNA stability
GO:0046872 F metal ion binding
GO:0048103 P somatic stem cell division
GO:0048793 P pronephros development
GO:0060216 P definitive hemopoiesis
GO:1900153 P positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:2000737 P negative regulation of stem cell differentiation
Transcript
Level		FPKM:3.03 TPM:1.35
ORF EntryO_BomaMSG3436_5prime_partial:A_BomaMSG_c12924_g1_i1
Sequence
(Nucleotide)
CCTAAATACAAGACGGAGCTGTGTCGCACTTTCCATTCGGTTGGCTTCTGTCCTTATGGA
CCGCGTTGCCATTTCGTGCATAACGCAGAGGAAGCAAGACGCAGAGAACCATCGTCGCCA
GGAGGTTCATTGGCATCGCTCTCATCGGGCGGATCTATGGCGTCGTATATGAGCGACGGG
TCGCGATCGCCACGCTCGCCGCATTCTCCATTGACGCCTCACTCTCCACCTGCGATGTCG
CCACCAGCACAGGCCACAGCTTTCGCTTTTCGCCGCACGAACTCCCCCGATCCGGAAGAC
GACCGACTGCCCGTTTTTAACCGACTCTCATCGGCTCTCGGCGATCTCGTCATCGCTTAG
TGCGATGGACTAGTCCTAAGTTAATTTATACCGAGTATAGCATAAGAATCGTCCGACACC
GTAGTGCCTCCTCGACGTCTTCCAGACCGCGCACGAGCGACGTCCCGGTCGCCGCGCCTC
GCGCATTTGCACACCCGCTCAACGAATGATCTCCTGATGTTTATCGATGGTCTTTTGTTA
ATACTTTCGACCAGTAATAAATCTTTAACATTTACGAAGTGTTCACTGGCGTCTCGAAAG
TTTGCGGTGTGATTAGTTTGTTACGTTCAATTTTAGTTATCGGCACGCACTTGTACATGG
C
(661 bp)

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