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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c12798_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		U6_snRNA-associated_Sm-like_protein_LSm6_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005688 C U6 snRNP
GO:0005730 C nucleolus
GO:0005732 C sno(s)RNA-containing ribonucleoprotein complex
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006397 P mRNA processing
GO:0006402 P mRNA catabolic process
GO:0008033 P tRNA processing
GO:0008380 P RNA splicing
GO:0030490 P maturation of SSU-rRNA
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0046982 F protein heterodimerization activity
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:6.31 TPM:2.82
ORF Entry
Sequence
(Nucleotide)
CAAAACACCCGCTTTGACCAACTTGAAAATTTTTAAGTTACATTTAATGTATTTCGTGTC
TTCAATTTCATCAGAATATTAAATAAACACAAAAAATGAGTCGTAAGGAAGCTTTGTCCT
CGTTTATACAGCAGATTCACGGTCGCCCAGTTGTCGTTAAATTAAACAGCGGCGTTGACT
ATAGAGGTGTTCTAGCATGCCTTGATGGATACATGAATATAGCCTTGGAACAGACCGAAG
AATATGTAAACGGACAGCTGAAAAATAAATATGGCGATGCATTCATACGTGGGAATAATG
TTCTGTATATAAGTACACAGAGGCGAAGAATATAGTTTAGAAAATACATGTTAGATTTTA
AGAAATAAAAATTAAGTTTCTTTTGAAAAAAAAAA
(395 bp)

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