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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c11411_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		splicing_factor,_suppressor_of_white-apricot_homolog_isoform_X2_[Bombyx_mori]
Ontology
GO:0000395 P mRNA 5'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
Transcript
Level		FPKM:2.32 TPM:1.04
ORF EntryO_BomaMSG2827_internal:A_BomaMSG_c11411_g2_i1
Sequence
(Nucleotide)
CTCATCAAAGCCAAGCAGGGTGACAATCCTCAGTTCCAGTTCCTCAACAAAGACTCCCCT
TTGCACCCATATTATAGTGCGCTCATTGCACTCATCAAAGCCGGTAAATGGCCTGAGAAG
AAAGTCGATTCTGTTGAAGAACGACCACCTGACAATGATGAATATCTCCATCCGAGCTTA
GCATCAACCATAATTGAATCTGCTCCATCGATTCCGAGCATCCAATACAAGCCATCAGCG
GACTGTGACTACACGATGCTGGTGTCCAGTCTGGTGGGGCCGCCGCCCGAGGAGCCTTGT
CCCGGGGAGGAGCCCCCGCCTGGGACCGAAGTTTCCGCTCCGCATCCCCATATTTCCAAG
GAACCCATCATGTATAACACGCAAGGAACATCGGATCCAAGGCTACAAGCAGCACAGACA
ACGTACTACCAGCAGTACGCAGCGTACTACCACCAGTACATGGCGCAGGCTGAAGCACAA
GCACGTGCGGAACAAAAAAAAGAAATCACCGTAACGAAATCTACTGGACTTAGTCTCATG
AAGAACTATAACTCTGATTCCGGGTCCGACGATACTGATTCTGAAGATTCTTCGTCATCG
GACAGTAAAGATCAAATAATATTGACGCCCCCGGAAGACGTCCAGACGGTGATCGACAAG
ATGGCCGCCTACGTTGCACGAAATGGCGACGAGTTCGCCGACATAGTGCGTTCGAAAAAC
GATCCCAGGTTCACGTTTCTGGAGCCCGATCACGAACATCATCCGTATTATAAAAGATTA
CTGCAGCAGAAGAAAGGCGTCGACGTGAATGGAAAGAAAAAGGACAAGAAGAATTCTTTG
CCTGTTTCTTTTTCTATAAAGAAATTGAAAGAGC
(874 bp)

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