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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c11302_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		TIA-1_homologue_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006915 P apoptotic process
GO:0006952 P defense response
GO:0007281 P germ cell development
GO:0008284 P positive regulation of cell population proliferation
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0010494 C cytoplasmic stress granule
GO:0017091 F mRNA 3'-UTR AU-rich region binding
GO:0017145 P stem cell division
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:63.76 TPM:28.49
ORF EntryO_BomaMSG2765_3prime_partial:A_BomaMSG_c11302_g1_i3
Sequence
(Nucleotide)
CCGAAAAGTGAACGTTTCACGAGTCAACAGCATCGTTTTTCGAGAAGTTCTAAGCGCTGT
TTGCGACATTTTTCTTTCATTTATTCGTTATCCAATGTTATAAGTGATGAAATAACACGT
TGTTAAGCGATTAATATTGATATTAGTGTTCATAGACGTTAAAAAAGTAATCGACAGATT
ACGATAAGCTAATATGGGCGACGAAAGCCACCCGAAAACTCTCTACGTCGGTAATTTGGA
CCCGAGTGTCACAGAAGTTTTCCTATGTACGTTGTTTGGTCAAATAGGCGATGTAAAAGG
TTGCAAGATTATACGGGAGCCAGGAAATGACCCGTATGCATTTCTCGAGTTTACGTGTCA
CACGGCGGCGGCCACAGCGCTGGCCGCCATGAACAAGCGAGTGGTCCTCGACAAGGAAAT
GAAGGTTAATTGGGCGACGAGTCCTGGTAACCAGCCGAAGACGGACACTAGTAATCATCA
TCACATATTCGTGGGCGATCTTTCTCCAGAAATCGAAACAAACATACTCCGAGAGGCCTT
CGCTCCATTTGGTGAGATATCGAACTGTCGCATAGTACGCGATCCTCAAACGCTCAAATC
CAAGGGTTATGCTTTTGTATCATTTGTAAAGAAAGCAGATGCCGAAGCTGCCATCCAGGC
AATGAATGGCCAGTGGCTGGGATCAAGATCCATACGTACGAACTGGTCAACGCGCAAACC
ACCAGCGAAGGGTGTGAATGAAGGCGCGCCCAGTAGTAAGAGAGCAAAACAGCCAACATT
TGACGAAGTTTATAATCAAAGCTCACCGACAAACACCACAGTTTACTGTGGCGGTTTCAC
AAGCAACATTATTACTGAAGAGTTAATGCAGAACACATTCTCACAATTTGGTCAGATACA
GGACATCAGAGTTTTCAGAGATAAGGGCTATGCATTCATTAGGTTTACTACAAAGGAAGC
TGCTGCACATGCCATAGAAGCTACACACAATACAGAAATAAGCGGTCACACAGTCAAATG
TTTCTGGGGGAAAGAGAATGGAGGTGCTGAAAACCAGGTTCGACACACGGCAGACTCGAA
CAGCACGGTCCCAGATCAGAGCGGGAACAACTCGTCGGCGGCGCCTCCAGCGATGGGCGG
CCAGTCCCAATATCCTTACCCGTATCAGCAAGGAATGGGCTATTGGTATGCTCAGGGTTA
CCCTGCGTTACAGGGCTACATGGCTCCCGGGTACTACCAGCAGTACGCGGCCGCGTACAG
CAACCCTCAGGCCGCCGCGGCAGCGGGGTACCGCATGGGAATGGGCGGTAATGGCGGCGG
CGGCGCCGGGTGGGGCGGCCCCTCGCAACCTCTCATGTACGCGTCGGCCGCCATGCCCTC
CGCGCAGTACCCCTCCCAGTAGCAAGGCCGCACTCCCCCG
(1420 bp)

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