SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c11302_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		TIA1_cytotoxic_granule-associated_RNA_binding_protein_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006915 P apoptotic process
GO:0006952 P defense response
GO:0007281 P germ cell development
GO:0008284 P positive regulation of cell population proliferation
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0010494 C cytoplasmic stress granule
GO:0017091 F mRNA 3'-UTR AU-rich region binding
GO:0017145 P stem cell division
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:13.40 TPM:5.99
ORF EntryO_BomaMSG2763_3prime_partial:A_BomaMSG_c11302_g1_i2
Sequence
(Nucleotide)
CCGAAAAGTGAACGTTTCACGAGTCAACAGCATCGTTTTTCGAGAAGTTCTAAGCGCTGT
TTGCGACATTTTTCTTTCATTTATTCGTTATCCAATGTTATAAGTGATGAAATAACACGT
TGTTAAGCGATTAATATTGATATTAGTGTTCATAGACGTTAAAAAAGTAATCGACAGATT
ACGATAAGCTAATATGGGCGACGAAAGCCACCCGAAAACTCTCTACGTCGGTAATTTGGA
CCCGAGTGTCACAGAAGTTTTCCTATGTACGTTGTTTGGTCAAATAGGCGATGTAAAAGG
TTGCAAGATTATACGGGAGCCAGGAAATGACCCGTATGCATTTCTCGAGTTTACGTGTCA
CACGGCGGCGGCCACAGCGCTGGCCGCCATGAACAAGCGAGTGGTCCTCGACAAGGAAAT
GAAGGTTAATTGGGCGACGAGTCCTGGTAACCAGCCGAAGACGGACACTAGTAATCATCA
TCACATATTCGTGGGCGATCTTTCTCCAGAAATCGAAACAAACATACTCCGAGAGGCCTT
CGCTCCATTTGGTGAGATATCGAACTGTCGCATAGTACGCGATCCTCAAACGCTCAAATC
CAAGGGTTATGCTTTTGTATCATTTGTAAAGAAAGCAGATGCCGAAGCTGCCATCCAGGC
AATGAATGGCCAGTGGCTGGGATCAAGATCCATACGTACGAACTGGTCAACGCGCAAACC
ACCAGCGAAGGGTGTGAATGAAGGCGCGCCCAGTAGTAAGAGAGCAAAACAGCCAACATT
TGACGAAGTTTATAATCAAAGCTCACCGACAAACACCACAGTTTACTGTGGCGGTTTCAC
AAGCAACATTATTACTGAAGAGTTAATGCAGAACACATTCTCACAATTTGGTCAGATACA
GGACATCAGAGTTTTCAGAGATAAGGGCTATGCATTCATTAGGTTTACTACAAAGGAAGC
TGCTGCACATGCCATAGAAGCTACACACAATACAGAAATAAGCGGTCACACAGTCAAATG
TTTCTGGGGGAAAGAGAATGGAGGTGCTGAAAACCAGGTTCGACACACGGCAGACTCGAA
CAGCACGGTCCCAGATCAGAGCGGGAACAACTCGTCGGCGGCGCCTCCAGCGATGGGCGG
CCAGTCCCAATATCCTTACCCGTATCAGCAAGGAATGGGCTATTGGTATGCTCAGGGCTA
CATGGCTCCCGGGTACTACCAGCAGTACGCGGCCGCGTACAGCAACCCTCAGGCCGCCGC
GGCAGCGGGGTACCGCATGGGAATGGGCGGTAATGGCGGCGGCGGCGCCGGGTGGGGCGG
CCCCTCGCAACCTCTCATGTACGCGTCGGCCGCCATGCCCTCCGCGCAGTACCCCTCCCA
GTAGCAAGGCCGCACTCCCCCG
(1402 bp)

- SilkBase 1999-2023 -