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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c10408_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_Topors_[Bombyx_mori]
Ontology
GO:0000209 P protein polyubiquitination
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005652 C nuclear lamina
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006997 P nucleus organization
GO:0007060 P male meiosis chromosome segregation
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007140 P male meiotic nuclear division
GO:0008270 F zinc ion binding
GO:0010032 P meiotic chromosome condensation
GO:0016568 P chromatin organization
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0051299 P centrosome separation
GO:0061630 F ubiquitin protein ligase activity
GO:0071763 P nuclear membrane organization
Transcript
Level		FPKM:3.41 TPM:1.52
ORF EntryO_BomaMSG2358_3prime_partial:A_BomaMSG_c10408_g1_i1
Sequence
(Nucleotide)
CTTCACTAAACATCAAAGTAGTGATGATAATTTTCCTCAGTATTTTATTCGCTCATTCCC
GTAACTCGTACACATATGAATGGACATAAAATATGTGTAACAACGTGGTTTTTAGCATAA
TATGTCAAATGTCCTGATTTAGTTGAAATACATTATTTATCACGTCACACTACAAAGAAA
TCTGTCAGGTACCTATCGTCACAATAACGTTGAAGATTTGAGACACATGATGTGGTGAAG
CCACTGGAAATATCACGATAGGCAATCATGGCGACTATACCACAATCTTTGGATGATATC
TCTGAAGCAAACCCAAGCAGCATAAAGAGTGATGATAGCAGTCCACATCATGACAACAGC
AGAGGGTCGCCACCTCCTAACTGTGCAATATGTCTAGGAACATGTAAAAACAAATCATTC
ACTGACTCTTGCTTGCACCAATTTTGTTTCAACTGTCTTGTAACTTGGAGTAAGGTAAAA
GCAGAATGTCCATTATGCAAGCAAAATTTTAAATCAATAATTTATAATGTTCGTGCCAAT
CAACAATATGAAGAATACCAAGTGGAACAGCGCCAAGTTGAAACTAGCCAGAGAATTGAT
ATTGATACACTCACAAACAGAAGGTTTAGATACAGAACTACATTGACATTGCCACGACGG
CAGTCGATAGCCTTCCAGCAGTTGTTGTTACGGCACTACCCACTTGTGGCAAATGTGTTG
AGTCCACCACGGCGTCGACGCTCTCCGGCTTCCTTCCGTCGCACTGTGTACCGACACAAC
CTGTGGGCGCGACCACTCCCCGAC
(804 bp)

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