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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c10272_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_UBR4_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005516 F calmodulin binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.76 TPM:1.24
ORF EntryO_BomaMSG2284_internal:A_BomaMSG_c10272_g1_i1
Sequence
(Nucleotide)
ATTGAACAGTTGCATCGTCTTGAAGAGACAACATTAACTTCTGATCTGGCTCAAGGTTAC
GCCTTGAAGCGTCTGACGGAGCTATTGGCGATGTTCCTCGAGGATGGCGGCGCCCGACGC
ACGTACAAGGGTAGACTGGTGGGCGCCGTGCTGGGCGGCTACCTGTCGCTGCGGCGCCTG
GTCGTGCAGCGCACGCGCCTCACCGACGACACGCAAGAGAAACTACTCGAACTGCTCGAG
GAGATGACTACGGGAACTGAAGCAGAAACAGCAGAGTTTATGGCCGTCTGTATAGAAACA
GTAAAGAAGTATCCGTTGCACGATTACCGCACCCCTGTCTTTATTTTCGAACGTCTCTGC
TCCATCATCTACCCGGAAGAGAACGAGATCGGAGAGTTCTTCCTCACACTTGAGAAAGAT
CCACAACAAGAGGACTTTTTGCAGGGTCGAATGTTAGGAAATCCTTATTCTTCTCTCGAA
CCGGGCATGGGACCATTGATGCGTGATGTAAAGAACAAAATTTGCACCGACTGTGAGCTG
GTAGCTTTGCTGGAAGACGACAACGGAATGGAATTGCTTGTCTGTAATAAGATCATGTCC
CTCGATCTACCAGTCAAGGACGTCTACAAGAAGGTATGGTGCACCTCTGGCGAAGGCGTG
GACGCGATGAGAGTGGTGTACCGAATGAGAGGCTTGCTCGGTGACGCTACCGAAGAATTT
GTCGAGACGCTAAGCCAAACCAATGCGGAAGCAGTCGACGATGAACAGTTGTACCGCATG
GCCAACGTCTTAGCGGATTGTGGCGGACTCGAGGTGATGTTGGAGCGGCTGT
(832 bp)

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