SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMSG_c10265_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		ribonuclease_Z,_mitochondrial_isoform_X6_[Bombyx_mori]
Ontology
GO:0001558 P regulation of cell growth
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006388 P tRNA splicing, via endonucleolytic cleavage and ligation
GO:0006409 P tRNA export from nucleus
GO:0007275 P multicellular organism development
GO:0007419 P ventral cord development
GO:0008033 P tRNA processing
GO:0016787 F hydrolase activity
GO:0016891 F endoribonuclease activity, producing 5'-phosphomonoesters
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0030307 P positive regulation of cell growth
GO:0036093 P germ cell proliferation
GO:0042780 P tRNA 3'-end processing
GO:0045727 P positive regulation of translation
GO:0046331 P lateral inhibition
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
GO:0072684 P mitochondrial tRNA 3'-trailer cleavage, endonucleolytic
Transcript
Level		FPKM:3.88 TPM:1.73
ORF EntryO_BomaMSG2278_3prime_partial:A_BomaMSG_c10265_g1_i1
Sequence
(Nucleotide)
CCTGTGTGTATTATCTGAATTGAGTTTTCAAATTCTGAACGTGAAAATGTGTCAAAATAT
TACATATTGTTAAAAAAAATCTGTAAAATATGTTATAATTTTTACATTATCAAAATAAAT
AAAAAACATAAAACTACGGATGCTTGTAAACTGCGGCTAACGTGCACTAACCTCAGAACA
CATCAACTATGCCAAAAGCACAAACAGCTCGAATAATGGAGATACAAAGAGGCAGACAGA
ACTTCTCAAAAAAGTCTGAAAAATATTCCCCTAGTACTGTGTATCTTCAAGTTTTAGGAT
CTGGAGCTCGTGGAGTGCCGAACACACTGTACCTTTTTTCTGATCAGAAACGGTATCTAT
TCAACTGTGGAGAATCTACTCAGCGCTTAGCACATGAACATAAGGTGAAACTGTCCAGAC
TTGAGCATATCTTCATCACAAGCAAAACTTGGAGAAACATTGGAGGCTTGCCGGGACTGT
CACTTACATTACAAGATGTTGGAGTACCGAATATAACATTGCACGGTCCTGAGGGATTGG
ACGAACTGTATAATGCCACAAAAAGGTTTGTGATAATGAAAGAAATGAATGTGGCTATGG
CCAAATGTAGTCCAAGCGAAGATTTTGAAGATAGCGTCATGAGTGTTAAATATGTTTTAC
TCGGCCCTCATGAAAGTCTACTAGCTAAAGATCCAAAACCGACAACAAAGAAACCTAAAT
TAGATACAAATACAGATAAGCAATTTGAAGAGTTCATTCACGATGATACAGACTATTATA
GAAATGAAATACGCAATGCCGAAGCTAAAAATAAAGTGGCGTTTAAAGAAAAGAACAAAA
CTAGAACAAGCCCTGAAAAAGATCAGATCAAGAAAAAAACTGATAAAGTTCTACATGATC
TTCAAAAGCAACCGCATTGCTCAGTAGCGTACATCTGTACACTTAAGAGACGACTAGGCA
CCTTAG
(966 bp)

- SilkBase 1999-2023 -