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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp89903_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		Vacuolar_protein_sorting_[Operophtera_brumata]
Ontology
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0006810 P transport
GO:0006904 P vesicle docking involved in exocytosis
GO:0007032 P endosome organization
GO:0008150 P biological_process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0019905 F syntaxin binding
GO:0030123 C AP-3 adaptor complex
GO:0030136 C clathrin-coated vesicle
GO:0030348 F syntaxin-3 binding
GO:0030897 C HOPS complex
GO:0031091 C platelet alpha granule
GO:0031410 C cytoplasmic vesicle
GO:0031901 C early endosome membrane
GO:0031902 C late endosome membrane
GO:0032400 P melanosome localization
GO:0032418 P lysosome localization
GO:0035855 P megakaryocyte development
GO:0048471 C perinuclear region of cytoplasm
GO:0055037 C recycling endosome
GO:0061025 P membrane fusion
GO:0070889 P platelet alpha granule organization
GO:0071439 C clathrin complex
GO:0090330 P regulation of platelet aggregation
Transcript
Level		FPKM:3.18 TPM:2.94
ORF Entry
Sequence
(Nucleotide)
AAATAATAATAATCCACTCCTAAAACAATGAGCATTAATTCTGTTCAATAGAAATAACAT
TACAGAGTAATTATTTGAAGAATACGTATAATCTAATAATGATGTAGTGGAACAGTAAAA
ATGAAAATGTCTAAAGTGATCGCCACGAATTTTTGAGTCTAAATAATCGAAAGGTCCACA
ATGGATCAACCACTCAATCTTAAATTGTCATCATTAACACTTATTTCACAAAACAAATTA
CAAAATATATTGAGTCAGTGTGGCGAGAAAAAGGATTTAATAATCGATCCATCCTTAATT
AAGGCTTTAGAAAGAATATGCGGTGTGACATGGCTCAGACAACATGGAGTTGACAAAATA
TACAAAATGGATCCCCAACTCGGTCCAACGGTAAACCCAAATAGAGTATACTTTATTCCA
GCATGCATCATAAAATACAAATGTGTCCTGGACCAAATATCATCGCTCATTAGTCAGAAT
CCATCTATAGCTGATGTTAATGGCTTCCACATCATTATAATTCCAAAAGTCTTAAATTCA
TTTGATTCAATATTAGAAAGTAAAGGTTTATATGGTGTGGTTAAATTACATGCATTCGCA
TGGGAATTAATGGTCCTCGATGATCAGTTATTAAGTTTAGAGTTACCATTTTTATTTAAA
CAGTTATTTGTTGACCAAAATCAGTCCTTACTGTCTGGTGTAGCAATGTCTTTATGGACA
TTATTTCATGTGACAGGGAGACCTAAAGTAATGTGTTCATTTGGTAAATTATCTGCGGGA
GTACTGGACATGTTAGAAATATATAATGAAACTTATTCTAGAAACTTTGTAGATACAAAT
AATTCAAGGGATATTGGAGCTTTACTTGTTATAGATCGTACCCAGGATTATGCGTCAAGT
CTGCTAACTCCAGCTACATACAGCGGATTGCTTAAAGAAATATTCAGTATAAACTGTGGA
TTTTTGGATTTGAATGTTAAAGATACAAAAATAAAGAAAGGCAAGTTAAATTTTGATAGT
GAACAAAGCAATGAAAGTAAAAGTACAGCAATGCCTTTAGATAGTTCTATAGATAGTCTG
TATGCTGAGATAAAACACAGACATTTCTCTGAAGTGCTCAGTGTTCTCAGTTCTAAAGCT
AAATTACTTAAAAACGAAGACATAAAAGCATTAGGTATACAAGAAATGAAGCACTTTGTT
GCGACCAAACTCCAACAAGTGACTCTCTTCAAGCAAAATCTAGTAAACCATGTGTTAGCT
TGTGAAACGATAATATCAGAAATGAGCAACAGATTTGAGAATCTAAAATTAACTGAGACT
GAAATGTTGAATAATAGAAACAAAAAGACCAATTATAATTTCCTCGATGAAAACTTCGGG
ACTGAAATTCACATTTATAATAGTTTGCGTCTGATGTGTTTGTTAAGCTTAACACAAGGT
TTGTCTTATGACGAATTCAATACATTAGTCAATAAATACCTCTTGGCCTTTGGTTACAAA
TATTTGTATGTATTCAATAATTTGATCAACTCTGGCTTATTAATTCAACCTTCGAATATA
AAGCTCTCATTAAATATTTCCAATTTAAGTAACTTAAGCGATAAATTACCAAAATGGCAG
AATGAATTTCAGACAGCTGCTCATAAATTAAAACAGTTACCATCTAAGCCAGATGATGTA
GGTAAATCATCACCGAGTTATGTTTTCAACGGTGGCTACATACCTTTAGTTGCTATTATC
TGTAATGCCATACTCACCTCTGAAAGCCTCAGTGAAGTTCTGACAAAGCTGTCAACTTTG
ACGGACTTTAAAATTGGTGGTGCAATAAATGAAAAACTGAAAGATGGTGTCGAGACGTTG
AATGAGAAATTGTCAAATCTTAAAGTTTCAAATGACTTAGAATTTGGCTGTAAAGATCCT
AAGATTTTATCTAAAGTAGTTAAAAGCGATCCGAACTTCTGTAATCTGTTTCCATTAAAG
CCAAAAACTATTTTGGTATTTGTAATTGGAGGAGTGAACTATGCAGAGATAGCTGCATGT
GAGGTTGTACAAACAAACACCGGAAGCAAGATTTATATTGCAAGTGATTGTGTATCAAAT
GGTAGTGATTTGATTGCTGCTCACATGTAACTTACTCTGTAAGTATAAAATCTTAATTTT
ATCATTTATCACAGCAGTAACGCATCATTGTTAATTAATGTGGTATATCAAAGGAAGTGT
AAATAATGTATAATGTTCGTAAAATCTATTTACAATGAGATCTGAACTACTATATTCACT
AGTCATGATTATGAATATTTTAAAATTTAAATTAAATTGGACTCAAAACGTCAGTTATTG
TGTTAGCAACAACTTGAGAATGTGCTTAAGTTTATTCCAAGTAACAATACTGTCTTCTCA
CAGAACAACTATAATCAATGATTCTGTGAATGAATGAATGTACTTAATGAATTCAGTGAA
CATAAACTTTTAAACTGTGAAATAACTGAAAGAAAAATTATTCTTATGAACATTGAAAAT
TACTTTACTCTTTATGTATTTAAGCTAGTACAAGGTACCCACTGGACCATTTTAATTACA
TAAGCTTA
(2588 bp)

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