SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp89547_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_trafficking_protein_particle_complex_subunit_8_[Bombyx_mori]
Ontology
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0005515 F protein binding
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0016192 P vesicle-mediated transport
GO:0030242 P autophagy of peroxisome
GO:0031410 C cytoplasmic vesicle
GO:0032258 P cytoplasm to vacuole transport by the Cvt pathway
GO:0034497 P protein localization to phagophore assembly site
GO:0044804 P autophagy of nucleus
GO:1990072 C TRAPPIII protein complex
Transcript
Level		FPKM:4.91 TPM:4.54
ORF Entry
Sequence
(Nucleotide)
CCGCGACCCGCACGAGGAGCGCGTCTGGCGCACGCTGGAGGAGATGCTGGTGCAGGTAGC
GCGCGGCGCCGTGCCTATGATATTCAAGCCGACACTAGACCTTTACGATGACACCACGGA
CTGTCATCCGCTCGTGCCCCAAGGAGAACCGATCCAGATATCTGTTACCTTATGGAATCC
CTTGAAGATATCACTTCTGCTGAAAGACGTGGAGTTGCTATGGCGTTTTACACCGCTTAA
CGAGTCTGGTGACAGCGATGACAATAATAGTATCTACAATGAAATCGCTTTAGCACAAGG
AGTGGAAGTAGCAAGTAACGTGATTGTTGGGCAAAAACTACCTTCAGTCGTTTTGGAAGG
GGATAGTAAAAAATCATTAATATTCTCCTTAACTCCTATGAAAGTTGGACAAGTTTACAT
TCAAGGATTAGCGTACAAATTAATAAATGCTGGAGAAGGCGCCTCTGAAAACAGTACTGG
TGTTTCAATACAAGGGAAAGTAGATTTAATGTCTGGAGTAAAAAGTATGGACAAGCGATT
GGAAATTACTGTCATACCAGAAGCGCCGTGTTTGCAGATGACCTTCTCGGAGACTAATCC
AGATATAATAAGTGGCGAAATAAGAACTGTAGACGTGGAACTGACCAATGTCGGACCCGT
CGACATGAAGAACGTTTTCATCGCGGTCTCGCATCCCGAATGTGTCAGTGTGGTCACGCC
GGATAATGTCGTTGATGATTTTAAAATTTTGTACGATGAAAAGTTTCGAGAAATTACACC
AAATTCAGAGGAGCGCGGCAGGGGCGCGGAGGCGTGGCGGCGCGCGGCGG
(830 bp)

- SilkBase 1999-2023 -