SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp82054_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_gem-associated_protein_5-like_[Bombyx_mori]
Ontology
GO:0000387 P spliceosomal snRNP assembly
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0016604 C nuclear body
GO:0017069 F snRNA binding
GO:0032797 C SMN complex
GO:0034719 C SMN-Sm protein complex
GO:0044822 F RNA binding
Transcript
Level		FPKM:4.60 TPM:4.26
ORF Entry
Sequence
(Nucleotide)
GGGCTGGCGGGCGGCGTGTACTCGCTGTGCTGGGGGCTGCGCTCGCACCTGTACGCCTGC
GCCTCCGGGCAACTCGTCGTGTACGACGCCTCCAGACCGGACCAACCCCCAGTACCAGTA
GGAGTGGAGTTTGAAGGGCAAAAGTGGGAAATTAGTTCAATTAGCTGGAGTAGTCGCGGC
TTCCTGGTGGGCAGTAACTCTGGTGGCGTTGCAGTACTCACTCACGAACTACCTCATACA
GTCACGGCTGCTGTGTTTGCATTTAGTAAAATGATTCATTCAATAGATTGGCATCCTCAA
CAAACTTCTAATTCAAATGAAGAATCTCCTTTAAAAGATATGATTGCGGTTTGTTCATTG
GACAATCAAAACACAATTATAATACTCGAGTATAGTGATAAAGGCGATCACGGACAGCTG
ACAACATGGAAAACGTTACGAGGCCACAAGGGAACCGTGTTCGAAGCGTCTTGGAACCCG
CATCATGACGATCTGCTGCTGTCCACGTCTTCCGACGCCACAGTGCGGGTGTGGGCGGCG
TCTAGTGGCGCCTGCGTGTCTGTGTTCGACGGGCACATGGCGCAGAGCGCGCTGGGCGCG
GCGTGGAGCGCCTACCCGCAGCTCGCCACCAAGGCGCTGTCCGGGGGAGGAGACCACACG
CTGAGGTTGTGGGACATGAACGACTTCCCCGCCGAAGCATACGACGAAAACAAATACGAA
CCTTTAAAGAAAGATAAAAATAAGAAAGAGAAAAAGGAAGTAAAAAAAGAAGATGAGACC
GCCAGTAGTGAAGTGGCAACCCTGAATCTGGCAGCGCAAGAGAAAACGAAGTCGGCGAAA
AGGTTTTTACTCCCGATATTGTGCAAACAAGCTTTGGGCTGTACGGACGGCTTAATAAGG
AGAATGTTTGAAAAGTATGGCCTGAAATCATCCACGAGTCCGTTCACTATCGAGAGAGTC
CAGGCTAGTTCAGGCGAGAATATAAAATGCGACGGAGTAGACAATGGACTTAATAGCGAA
ATAATAGAAGAAAATAAGGGTAAAGACTACGGTGCCGATTTCATTAAAATATTCGGAACT
ATTCAGGAAGTTAACGAAGTCTTAGATAAGGAACAAACACGTCATTTAGAATTGTCCAAT
ATTGAATCATGGATGATGCTGTCGATATTCCGGGGGCACATCGACGCCACCATACAATAC
GCAAGCCAAAACGATTTGCTCTGTCCTTATCTACTTAGTTTGACGCCTTGCGTCTCGCTC
AAGTACTGGAAGGATGCCACACAATTATATTTAGCACAAATAGATCGACTGGTAGCGAAG
ACTGAAGGTCATAAACTATATGAGAATAAGTACTACGGCGGGCCGGTGTACCGCAAGGCG
CTCACGCGGCTGAGCACGCACGACGTGCGGGGCGCCGTCGCGACACTCGCCGAAAACAAA
CTATACAAAGAAGCATACGTCCTTTGTCGTGTCAGGTACATGGACAGCATTGCAACACAA
ATTCTGCACCAATGGGCAAATTACTCCAACCTTTGCGGGAATTTTGAAATAGCCACAGTT
TGTTTTATTGCTTTAGGAGATTTATCCGAAGCAGCCACGGTGCTCGCGAAGTCAAAGAAA
CAAGAAAACTTGTGTTTAGCAGCGGAAATAGCTAAGGCAGCCGGTCGGGCCACTCTAGCT
GATCACATCGAGAAAAAGGCACAAAACACAATCCCATCAACTTCAGATGAGACCGAAGAA
ATTTTGAAAGAGCTCCCCACTAAAATGGAATTGCTTTTAAAGCAAAACAATAATTCAGAA
GATAAGGCAGTGAATTCGAAAGACGAAGAGCCGGTTGGAAACTTAGTTGAGTAAAAATAC
AGGGATTGACGACTGTTGTGATTGATATTTGTTGATTTTGTATTGTGGAAGGATTTTAAA
AATCCACACTTTTTGTTTTATGAGTTTTGTGAAGTATTTTTAACTGTGTACACGTGCAAA
ATAGGCTTAAGCGATCAATGATATCTTGTGCACGATCTCGATTACAACTAAAATATTGTT
GAGGTTTGAAACGATGAAAATACTCGGGTTATGTGTGTTACAGTCAAACTTTTTGTTTTT
TAGTACCTTAAACTGAATGCATGTTGTTTTTTTTTTTCAAATAAAATTGTAAAGTTATGT
TGTATGTTAAGAGTACAGTTTTTTGTCATCCATAAATAAAATAATAAAATACTATATTAA
GACTTTAACCTAATATCTCAACGTAGCTGGTGGCATTTGCATTCTACTGTTTATGGGCTT
GTTGAAACTCTATAAAGTGCTCACGTCAGCACGTTCTTGCATCAAATCAGCGTTAGGTAA
ATTAATATTAGTCCTGTAACTTTATAATTCGCGCAGTTGATTGTCAATATCAATAAAGCT
TTAATATAACTATGCGTACTGTGAATCCTTTTAGTTTTAAAGTTATCCATCACTATCCAC
GTATTTGCATTTGTTACATTATATTTTTGGTGATATTACAAATAAAC
(2507 bp)

- SilkBase 1999-2023 -