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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp80849_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		orthodenticle_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0001745 P compound eye morphogenesis
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007355 P anterior region determination
GO:0007389 P pattern specification process
GO:0007399 P nervous system development
GO:0007417 P central nervous system development
GO:0007419 P ventral cord development
GO:0007420 P brain development
GO:0007628 P adult walking behavior
GO:0008056 P ocellus development
GO:0010628 P positive regulation of gene expression
GO:0035284 P brain segmentation
GO:0035288 P anterior head segmentation
GO:0042051 P compound eye photoreceptor development
GO:0042052 P rhabdomere development
GO:0042463 P ocellus photoreceptor cell development
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0045315 P positive regulation of compound eye photoreceptor development
GO:0045871 P obsolete negative regulation of rhodopsin gene expression
GO:0045872 P obsolete positive regulation of rhodopsin gene expression
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046552 P photoreceptor cell fate commitment
GO:0046982 F protein heterodimerization activity
GO:0048816 P ocellus morphogenesis
GO:0061541 P rhabdomere morphogenesis
Transcript
Level		FPKM:3.60 TPM:3.34
ORF Entry
Sequence
(Nucleotide)
CGCGGGGCGAAAATATAAAGATTTTTTTTTATTAAAATTACACTCCACGTAAAAAAAAAA
AAACACCCTTGCTACAATAATCTTTTTATGAAACATAAAAATTATTTGAAAGGCCCAAAA
GAGAATAATTATAAAGATACTTTTCGTCTCCTTACAAACTATTATTATTCACATATACAA
TCTGAGCGCACACATATACAAAATGAAAAGTCTTCAAATGTTCATTAATATTTATTTACA
AAATACACTTAATTACGCGTTGCCTTTTTATTATTTTTCAATCGAAATATTCACTAAAAA
TACCTTAAACGTTTATACTTAACTTGATATGACTCCCAAGGTATATTACACAGGCATTCG
AAAAAAGCAAATTAAATATATATGTATTTTTATTTTACATTTTTATCACTATATATATAT
ATATAGTTATATTTAAAATATAATTATGGCAAAAAAACTCGTTCGATAAAACATTAGGCC
TTGTCGATTTAAAAAAAAAAACGAAATATTAAAAAAAAGTAAAAATGTTCGATGAAATTT
CGTTATTTTGAATTTAGAACAATTCGTGACGGAGGTTTTTTCACTTCCGATTTTTTTTTC
TTAATTTTTTTTTTTAATTAACCTCCTCGATTGTGATTCGGGCGTTGGTTTATATGACTT
TTGGATGCGCGATCATCGCAATATCAATTGTGATTTCGTTTGGGTGTTGTTAGAAAAAGC
ATCGAAAACATTTTGTCGCTTATAGGGAATCTCTTTGTTTCGTAACTGATATACATACGC
TTCAAGTTTTCACTGTTCTTCAAATTTAGCGTTGTGTGTGTTACGAAGGACCAAAATAAA
TATAATAAATAAAGTACTCGAACGCTAAATTTGAACGAACAGTGAAATCGATTTTCGTAT
ATCGATTTTAAAAAACGCCGCCGCGAAAATCGGGATATTTTTTTTAGCGGGAACGAAAAA
AGAAAACCGCTCATTTTTTTTAAATTTATTTACGGCTAATGGTTACAAGACCTTATAGCC
TAAATAAACCGCTCATTTTCGTTAATGTTGCAAGACCACAAACAAACAAATTCCCTGTAA
ACGACAAAGGTATATATTTATTTACAATAAAAGACTAGAAATCGCATTAGACCATATTTA
TTCCGTATTTCTCGGGCGCGAAGTAGCTGTTTCCCGTGTTGGAGAAGTTTGTTATCTGCG
TTGCTTGGAGCATGCTCAGATGAGGATTCTGCTGGTTCTCCGGGGACTCGGGACCTGAAG
CTAGAATGTTGTGGGACGACCAGCCGGTCGGAGGCGAGGGGTTCCCAAAGGACACTTGGT
TGTACAGCTGATTGCTATTGGTGCTCAAGTTGTGGCCGTGGTGTCCTCCGTGGGTCTGGT
TCACGGACGTACCGTTGAAGTATTCCATCTGACTTGGATAATAAGGCGAATTGTAAGCAC
TCTGCCCGTATCCTTGGTGATGATGTGAAGTTGAGTAGCTCCTAATGTAGTCCGAGCTGC
CGGGCCAGTGGAAGCTGTTGTAGTTATCCGGGTGGTAAACGTTCCCCGGGCCATTAATGC
TCTGGGGGGTGATAGGGGGCGATGGGGTCGTCATGATCGAGGAATTGGAGCCCAGCGGCG
TCAGGTTACCGGTTAAACGGGAGCTGTATTGGTCCTTGACAAGGTTACTGCCGAAGGATT
TTTCGGTGTAATCCAATTTGCTGGAGTATTCTAGCCTTTTAGGGCTACTGTACAGCTCTT
GTTTGGGCGTCACTCCGTAGCCGTGGATGTCTGAGCTTTCCTTTCCGCTCACCCTTGAGT
CGTAGTGAGACAATGAAGTCAAGCTGTTCTTGGTCAATGGGGAAGTCTCGTAACTAGATC
CGGCCGCCTCCTTCTTACAGATCACGTTAATCGGGGGACTCACTGAAGTCGTGGGCGTTA
TCGGTAGATTCGGGGAGGAAGTTGTGATCGAGGAGTTTTGGCTTGTCGTCAAACTCGTGG
AGGAGCTCGTCATGGTTTTGGAGGTGGTCGCTTTTGAGGCGGACGTCGAGTTTCCTTTGA
TGGCGTTGCTCGACGATACGCTGGTTTTCGCGCTCGACGACGACTTACTCGTTATCTGAG
AGTTTGTTTGCTGTTGTAACTGTTGTCTGCATTTCGCTCTCCGGTTTTTGAACCAGACCT
GCACTCTAGATTCTGGAAGGTTTATCTTCAGCGCGACCTCCTCCCTCATGAAGATGTCAG
GGTATCGCGTCTTCCCGAACAATGCTTCGAGTACGTCCAGCTGAGCTCTTGTAAAGGTAG
TCCTTTCTCTGCGCTGTTTCCTGGGGTTCACTCCTTGAGGAAATCCTACGGCTTCCAATC
CGTGCGGGGTCAGCCCGAACGGCCCCAAGCCGCCGAGCGGCCCGGGCCCCATGCCCATGT
GGTGAGCGCTCGAATGATGAGCATACGGGTTCTGCGCCAACGGCGACGGTTGCTTCAAGT
AGTGGAAGTAGTGGTGTAGGGGCGTCGTGGAGTGGTGGGCCTGCGGGGCGGTCGGCCCGC
TGGCCGTGGGACCGGTGGTCGAGGAGTTGGTCAGCAGCGCCATGTCGGGTTGAGTTAGTC
ACCGGTGCAGCCTTCTTCGTGTGTGTGTGGACATCTTGGGGAGGCGTTTTAGTTCGAGAC
TCGATTCGAAGGTCGGCACGTAGACATGTTTTTGGTTCTTGAAAACGTTAAAATCCAAAC
ACCGAAGTAATTCAAATTAAAAAAACACTAAAACCAAAAAACACATGGAGCTCGATTCAA
TATAATATATTTTTTCTTTCTTTTCTAAACATAAATTCGTCAATCTATCACTGGAGTTGA
ACAACAATTGATATGTTCATAATCTTATCAGGGAGAACATATTTTTTAATCAGTTTATTC
ATTAAAACACTTTTACAAAACTATATTTAGGCCTTTTTGTGTGAAATCTAAGAGTTATGG
CGTTGTACGCGGAGAATTCGATAATGTACCGCGGACAGACGCGTCACCAATGGCGGCG
(2998 bp)

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