SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp64897_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_trafficking_protein_particle_complex_subunit_8_[Bombyx_mori]
Ontology
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0005515 F protein binding
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0016192 P vesicle-mediated transport
GO:0030242 P autophagy of peroxisome
GO:0031410 C cytoplasmic vesicle
GO:0032258 P cytoplasm to vacuole transport by the Cvt pathway
GO:0034497 P protein localization to phagophore assembly site
GO:0044804 P autophagy of nucleus
GO:1990072 C TRAPPIII protein complex
Transcript
Level		FPKM:4.05 TPM:3.75
ORF Entry
Sequence
(Nucleotide)
GCGAAGCGAGGGTGGGTCGCTAGTGAAGAATAAACAATGAGCTGAATTAAAATAATGGGT
TTCTATCGCAAGCAGAACGCTACAACTAAGAACACCAGGAAAACTACATGCAGGCGTCCT
GCTTAAAGGATACGATAACCGGTACACCCAAAATGATCCTAATTCGCGTCGCTTAAGTCT
AAGAATTCTAACAAGGACCCTAAGCTATAAGTTGGAAAGGTACATGCAGAAGCTCCGCAA
CTACAATTGACTGGAGATATGGTAGAGGAACGAATCCCTTTTTACATATTGTATGACTCT
TAGGCAGCAAAAGATCACTGCCCCGACAATGTTAAGAATATTTGTCCAAGAGGAGTGCCA
GTTTATGCCGGATTTGGACACATCGTTCTGGAGTCGTCACGGAGAGATCCGAGTATCACA
AGACTGATGTCCCACCGCCCCTTGATGTCAATAATGATGATGTTAAAAAATATTTTAAGT
GTTAATTGTGAAACTTTTGCTTCAAGAAGTGACTTTTGAGACTGGGTTACATTTGGTTCC
ACTGTGATTAAATCGGTTATAATTTTTGTTCACTTTGATAGTAGTTTAAATTATCTACGT
ATTGTGCAAAGTGTGTTTTAGGCCTAACGTGTAGATAGATACCACCGTCTAACACCAACG
TGCCGTCTGCTGCGAATTGATACATATTATCAATTTGAAGGATAGACAAGTATAGCTTTC
AATCACATTACAATCGAGATTTCCAGTTGTTATTGAAGTGGCTACATTCACTTTAATATG
TCACTTTAATATATAATAATGTTCTGGTAATGACAGGCCATGCACTAGTCTGCCTGTTTC
GGTTTTAGGATTGTTTTAGCAAACACGAATTTATTTAATATGAAAATAGTTATCGCCACA
TAAATAAGAATAATTTATAAGAACTAGCACATCAATAAGCGAATTTGTGTTCTGTATTAC
CTTAAAATTAAATATATAGGCTATACTGCAATTTCGAACGAATTACGGGAAAAATTAATC
AAGTCTCAATATTGTCGCTATAAATTACTTTCAGAAAATAGAGAAATGTCACTGTCTAAC
TTTCCGAGCATAAGCTATTCTTACGCCGACGGTTTCATTTGTTTCATACATTATTCCCAT
ATTTTTTTTCTTATTTATTATGTAACTGTAATAAATTAATATAAAATAAACATAGGCTAA
ATAAAACCAGCACTTAATGCATTAATATCAGTATTTTAACCTAATAAGTACGACATTTGA
CCTGTACTACCCACAATAAAAAACAATGATTTGTCTATGGGTGCATTAATTCTGAAAATA
TAGTTATACTTTACTGTTCAATCTTTTCGTGTTAAAATTTGATTTCGTTAAAACAAATTC
CGAGCCTGCGGCAACAAACTAAGGTGCCTATTACATCAAACTTACGTGCTCCCAGTAACA
AAAGTTGCAAATTATAATAATATTAATAATTGGGGATTTTAGACGAGAGAGAAACTAGGA
ATCTTTGTTCTATCGGAACCAGAGATTCATATTCATACTTTTATACATTTAAACATATAA
AAATGTAGGTACCTATTGAACAACAGATTAATCTGATGAGGGGCAGTTTAACTCACGACC
CTCGGCCTAGCGACTACTACGACACTATGTCAGAATGTGTTAGGGCTTGTTTGGTAGTAT
GAACTGTCAAAATACGTTTAAAACAATGATTCCAATAGTACAAGAATACCATCGCCGTTA
TGAAATACTCAACACAGAATACATATTATATAGATAATCATAAGTATTATGTTAAAATAA
ATAAGAGTTCCTTTACTTGTTATTTTTACCGAACTTCCAGAGGTTCTCAATTCAAACTAA
ATATTTTTAAAGTCGTTTTTACTTTGTTTGCATGACGGTAGTTCTTTTTATTAGTGTTAA
ATGTATACATACTGTCGTAGGTTTTTCATTTTTATATGATATATTTTTTGTTGATAAACG
ATTCATTACGCTTGCTGTAAAACCAATAAGGACGTGTTGTTCGAGACATCGGTTACGTTC
ATATGCGGTTCTGTTCCTTGTGTCGTAACAGTGAATGCCGATCCGACGAGGTAGGTGCCG
GGAGCCGCGCAGACGCCCTGCACTTGAACGCGGCGCGTTTCGAATTTCTCGAGATGAATA
CTGACGCCTATTTCTTTAGAGTCCGCGTCGGGTCCGTTGTGCAGCGCCCCCGTCCACCCG
AGCTCCCTTCCAGACGTTTCCCTGTTCTTCTGTTTGCTCATGTTTATAAACACCCTTACA
GGGACTCCATAACAGTTAACGATGCTCAGTGTGACTGGAATAATACAAAGTCTTCTTTCG
TTGAAATCGTGATTTATCTGTTTCGAATGCTCCATCTTGAACATTACAACGTTGTCTTTT
TTAATATTTTTTTTATTTTCAGTAACGTCAAGCTTACTCTCGTTTTCATCGAGGGGTAAG
GGAGGATTGTTGTCAGTAACTAATACTTTTTCTCCGTATTGCACCTTGTTGAAACAATCC
AACCATAAACAATGTTGGCCGACTGCAGATCGCCCTGTCGTTTCATCTTGTGCTTTCCAT
CGAAGAACGAACATAGACTGGAGTAAACCAGACCTTCTTTCTATGTCTTGGTTAAATGTG
TTGTCTGCTGAATCGATGAATGAAGATTTTTTGTCAATCATAAATTTAGAATATGGTGGC
GATGTAATATCAGCAATAGAGTCCGGATGTCCTTCGGAAATTTTAACACAAGAAGTTTCA
ACTCGTCCCTCGGGAACCGCTTCGAGAATTCTGTGACCCTTAAATACAAGATGAAGTTTT
TCGCGGGGCGCCAAAATGTCATTCTTGTCTCGGGCGGCGATAAGGTTTGTTATTTTCCAT
TGTCGACTCAAAAACGCCGCTTCCAAAAGCTCAATATTTATTTGGTCACTTTTATTTTCG
GAAATATTTGATACTTCCACAGATAAGTTGACAATCTCGGCAACGCTTTCGTTAACGGTT
TTAAGGCTTCGTCTCGGGTTTATAGTGATATCAACAGCGTCCACTACGTTGAATCGGAAG
ACGTGTCTGAGCAGTCTGTAGGGGCGGCGCTCGAGTCCGGTCTCGTAGTAGGCGAGCACG
TGCAGGCGCGCGGCGGCGC
(3139 bp)

- SilkBase 1999-2023 -