SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp49685_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RNA-binding_protein_25_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0042981 P regulation of apoptotic process
GO:0044822 F RNA binding
Transcript
Level		FPKM:8.23 TPM:7.62
ORF Entry
Sequence
(Nucleotide)
GCCCGCACGCCGCCTTCGCGCAGGACGACGACGACGCGCCGCTCAAAGAGAAAAAAGACA
AAGAAAAAGCGGACAAAGAAAAGAAGAAGAACAGTGACGGAGACAAGGAGAACAAGAGCT
CCGAGGAGAAACGGAAACACATCAAGAGTCTCATCGACAAGATCCCCACGCAGAAGGAAC
AACTGTTCCAGTACAAACTGGACGCCTCGCAGATCGATAACACGCTCATGGAGAAGAAGA
TACGTCCATGGATCAACAAGAAGATCATAGAGTACATCGGCGAGCCGGAGCCCACCCTCG
TCGACTTCATCTGCAGCAAAGTGCTCGCCGGCTCCGCGCCTCAGGGAGTGCTCGACGACG
TGCAGATGGTGCTGGACGAGGAGGCGGAGGTGTTCGTGGTGAAGATGTGGCGGCTGCTCA
TCTACGAGCTGGAGGCCAAGCGCGCCGGCCTGCACAAGTGAGCGACGCACAGACGGACTC
TCTGTAAACTAATGTATGGTTATCTTTTGAAATAAAACTATTTTTGTACCCGCGTGTTTA
TTGTTGCATTCTAAAGTCGCTGAATGAACACGAGCAGCCGCGGGCGCCGCGTCGATGCGA
CACGTCGATTATTATTATTATTACATGTAAATAGTAGATATTTAAATTAAATGTAACGAA
TTACAGTGCGTGAGATCGCAGCCGTCGCGCTCCGAGCTGATTATATATTTTTGTATATGG
ATTATGTACGCAACGAGCAGAGCAGCGACGGTGTGTAGGAGTGACGTCACGCGCCGACCG
ACCGCGCGCGCACTAGTGACGTCACACTACACCATTACTCCTCTTTGTCAATTTGTTAGA
TTAACATTTCAATCAGAAGCAATATATATATCGACGCTTGAAAGG
(885 bp)

- SilkBase 1999-2023 -