SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp44516_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_sel-1_homolog_2_isoform_X1_[Bombyx_mori]
Ontology
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007219 P Notch signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030970 P retrograde protein transport, ER to cytosol
GO:0034976 P response to endoplasmic reticulum stress
GO:0036503 P ERAD pathway
GO:0036513 C Derlin-1 retrotranslocation complex
Transcript
Level		FPKM:12.11 TPM:11.22
ORF Entry
Sequence
(Nucleotide)
AGAAATCAGTCCTATAAATTTATTTTATAGAAGAGTTGAGAATAATAGACTTGCACGTAA
ATTATTGATAAATTAATTGGCCTTTTACTTTAAATATACACGTGTAAATCTATAAGTGGT
CACGGAAACTTTCCTTTTATTCGCCGGTTAACGTTAAAACAAAACATAAACAAGTGCTTG
GGACACGTAAGTGCTGTGAGTGTTGTTATTATTTATTCGAACCGAAAATATGGACCGCTA
CAAACTATTAGTGCTTGTTCTGTGTTTTTCGTTAACGACTACCGACCCCGTTGGACCCGA
ATCACGAAGGGACTCCGAGAAAAACGAAGAAGATGATGTCTCGAGTGAAGTTGAAGAAAC
GAAAGGGAAACCCGATTCAGAGTACATCAAAGAACTGACTGATGCTATGAATAAAGAGAT
ACTGACGTTACAGGAGTATGCTGATGCTATGAAGAGTCAGTCGTCAAAAGATGAAACAAA
TAAAGAATCACACTTAGAACAAATGGCATATACTTTAAAGCTCTTACAGAAAAGTCTTAA
GAAGCACTCTGAACCAACTTGGCTTCCTAACCAAAAAGCAGAACTGTCTGTAAATGAGAA
ACCACTAGAGGAGAACCCACAGGATATTCTGAACAGTCTACCACCATTACCAGAGGAGAC
AGAACCAGAATTAACTCCCGAATTAAAAGAAGCCAAAGAATTGTATGATGCTGCAGTAGC
AAAACTAGATCGTCGAACTTTGGATGTCGATGCTTCCATCCTTCAGATCAAGCAGGCAGC
CGAAGTCGGATATGTGCCGGCTAAGATCAAGCTAGCCTGGTCATACCTCTATGGGGAGGG
GGTCGAAATAGATTTCGAAAAAGCTAAGAGCATATTTGAAGAGTTGGCAGCCGAAGGGAA
TGCTGATGCCCATGCGGGCATGGGCTTCTTATACGCAACAGGCATCGGAGTCCCAGTGTC
GCAGGCAAAAGCCGTGGTGCATTACACTATTGGTGCGATAGGTGATAGCTCGTACGCACA
GATGGCGCTGGCGTATCGATACTGGAGCGGTCACACGGTGCAGAGCTCGTGTCCGAAAGC
AATGGATCTTTATATGAAGGTTGCTGCCAAAGTGGCAAGTAAAATGACATTGAACGGAGG
CCCGGCCATACATCGCACGCGGCTCATCGACGAGGTGGAGGGCGGGGGCGGAGCCCTAGA
CACGGATCTCATCGAGTACTACCAGCTCCTCGCCGAGAAGGGTGATGTACAAGCACAGGT
GGGTTTGGGGCAGTTACATTTTCAAGGAGGCCGCGGCGTGACCCTGGACATCAACAAAGC
GTACCACTACTTCCAACAGGCGGCCAAGACGGGGAATGCTGTGGCCCACGCATTCCTTGG
AAAGATTTATTTAGAAGGCGGCGACGGCATAGTGGCAGACAACGACACGGCATTCAAGTA
CTTCAAGAAGGCGGCTGAATTGAACAACCCTGTGGGCCAAAGCGGACTAGGGTTGATGTA
TTTGCAGGGCCGCGGCGTTCCCAAGGACACGACGGCCGCGTTCAAGTACTTCACGATGGC
CGCCAACCAGGGCTGGGTCGAGGGGCAGTTCCATCTGGGCTTCATGTACTTCGGGGGCAT
CGGCGTGCGGCGCGACTTCAAGCAGGCCAACAAGTACTTCTCGCACGCGTCGCAGTCCGG
CCACGTGCTGGCGCTGCACCAGCTCGCGCTCATGCACGCTCACGGGCTCGGCGTGCTCAA
GTCCTGCACCACGGCCGTAGAGCTGCTGAAGAGCGTGTGCGAGCGCGGGCGGTGGGGCGC
GCGGCTGCAGGCGGCGCACGG
(1821 bp)

- SilkBase 1999-2023 -