SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp42801_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		DNA-directed_RNA_polymerase_subunit_[Operophtera_brumata]
Ontology
GO:0001193 P maintenance of transcriptional fidelity during DNA-templated transcription elongation from RNA polymerase II promoter
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005730 C nucleolus
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007067 P mitotic cell cycle
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0008270 F zinc ion binding
GO:0022008 P neurogenesis
GO:0046872 F metal ion binding
Transcript
Level		FPKM:20.30 TPM:18.80
ORF Entry
Sequence
(Nucleotide)
GTATCTTTTAAATAAATCTTACAATGCAAAAGCTCTGTCTACTCTGTCCATCTATGTTTA
CAACTTGTGCACACATAATACAATCTCATTTCTTCTTCGGCGCGTCTCGTCTGGCCTTGA
AAGAATACTGCTTCTCTGTGATTACACTTTGGGCACATGTGATCCTTGGTTCTAGGTAAA
GTCGGGTCGCTTACTACATCAGGGTTTATATGCGTCAATTCGTCTACCTCGTGCATAATT
TTGTTGACGTAAACGCAATTTGAATCCGCAAGTTGTTTATAATCACAATTTCTGCACGCG
TACAGCAAAACTTTGTTATTTTTATCTTCGCGCGGGTAAAGCATATTGTTACATTCTTGA
CAAAATTGTATGCCGACATAACCAGGACCGCCGTCTTTTCTACTTAAGCTTATAGCACTC
ATTTCCTTACTGGTAATTTTAAAATGTCCTATTCGAAGATAATATAACCACCTCGAAGCG
TTTTTTAACACTAATTTGACATGAAAGACTACACAGAGGTGTAGTAATTTAATTTTACGT
TATCATTAAGTTTGCTTGTTGGTGTTTTTGCTTAGTTTAGTAAACAAAAATGGCGGTATC
TTTTTTGAAGTGTTTTTGAACAGTCTG
(627 bp)

- SilkBase 1999-2023 -