SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp40545_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		ATPase_type_13A1_[Helicoverpa_zea]
Ontology
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006812 P cation transport
GO:0006874 P cellular calcium ion homeostasis
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0015410 F ABC-type manganese transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0019829 F ATPase-coupled cation transmembrane transporter activity
GO:0034220 P ion transmembrane transport
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0071421 P manganese ion transmembrane transport
GO:0098655 P cation transmembrane transport
Transcript
Level		FPKM:16.59 TPM:15.37
ORF Entry
Sequence
(Nucleotide)
TTCACTCACTACTTTTGCAATTTACAACATGTCAATAATCTGTCAAGTTGGCTAGACTCC
GAAATCAAACTATTATTTTGAATTAAAACCAATCAATTGAATGGAGCAATGCTGCGTGAT
AGTATCATTTAGTTAAAATTTGGCAACTGCGTTAGAATCCGTATCAATTAATAGAATTTT
TCATAGCGACATCGATGGTAAAGATGCAGTCGTCACTAGATGATTTAGTTCAGTATACAC
AGCTTTTCAAGCCTGTTCCGACTGTTTTACAAGGCACGGTTTTGCCTTTTCTATTTATTT
ACCCTCTGGTTTTTTATTCATGGATCGTTGTGTACGGTATAGAAGATAATTTCGAGGCAG
GATTCGTGACTGTGGCTGTGATAGCAACAGTCCAGATCCTCATATGTTTGTGTTGTTACT
GGAGTGTTCATATCAACTGCTTCCTTTCTTGTTCAGCGGTTAAAGATCCAATACAAGCTG
AGGTAGTCAAGGTTGTACCGACTTCTAACAATGGATCATCTGAGCTTGTTCGACTACATC
ATACGAAGTCAACAAAAAAAGACAGTATACACCCAGATGTTTGGTTCATATTTCAAAAGA
GTAAATATGTGTATGACTGGGATAAAAAGAATTTTCACACCATAGAATTTCCTATCAATA
AAATTTATGAAGAATATATGGAATCCAAAGGATATTCTGATGATGAGGCTATTGATTTAG
CAGAAAAAGAATTTGGTAAAAATGAGATGGTTATGGTTGTTCCGGAATTTATGGAACTTT
TTAAAGAGAGAGCAACAGCACCATTTTTTGTATTTCAAGTATTTTGTGTAGCTCTGTGGT
GTTTGGATAAGTATTGGTATTACTCAATATTCACACTAGTGATGTTGGTTATGTTTGAAT
GTACATTGGTGCAGCAACAGCTCAGAAATATGGCTGAGATCAGGAAGATGGGCAATAAGC
CTTACAACATTAATGTATATCGAAACAGGAGGTGGAGACAAATAACAAGCGATCAGCTTT
TACCGGGTGACATAGTATCCCTCACAAGATCCGTCAACGAAAACCTGGTCCCTTGTGACA
TAATACTCTTACGGGGATCCTGCATTGTAGATGAGTCCATGTTGACTGGTGAGAGTGTTC
CACAAATGAAAGAAGCTTTGGAAAATGAAAAGGACCTCCAGCAACATCTAGAACCTGAGG
GTGATGGTAAACTTCACATGCTTTTTGGTGGTACTAAGATTGTACAACATTCCTCACCAT
CCAAAAGCTCACCTTCAGGGCTTAAAGCCCCGGATAATGGTTGCATTGGTTATGTTATAC
GTAATGGTTTTAACACATCACAGGGTAAACTGCTAAGAACCATTTTGTTTGGAGTGAAAA
GGGTCACAGCTAATAATCTTGAAACTTTTGGATTCATAATGTTTTTGCTTATATTTGCTG
TAGCTGCTGCGGCCTATGTGTGGGTCAAGGGTTGCGAAGATCCTGAGCGAAATAGATACA
AATTATTTTTGGAATGTACTTTAATATTGACATCGGTTGTTCCGCCTGAACTGCCCATAG
AGTTGTCTCTAGCAGTTAATACGTCATTGTTGTCTTTATCGAAATTGGCCGTATTCTGTA
CAGAACCATTTAGGATACCCTTTGCCGGTAAAGTAGAAATATGTTGTTTCGATAAGACTG
GAACATTGACAAGTGATAATTTAGTTGTTGAAGGAGTAGCTGGAATAGGAGAACACAAAG
ATGCAACAGTGGTTCCCCTTTCTGAAGCTCCAATGGAGACTGTTCAAGTTTTAGCATCGT
GCCACTCTTTAGTTCAACTTGACGATGGAATTGTTGGGGATCCATTAGAAAAAGCTACAT
TGAAGGCAGCAGAGTGGAACCTCACCAAAAGCGATGCTGTAGTACCAAAGAAGGGGAAGT
CACCTGGCCTGAAAATTGTTCATAGAAATCATTTTTCTAGTGCTCTCAAAAGAATGTCCG
TGATAGCAGGTTATCAGATCAATGAAAGAGGTTTTATTGAGACTCACTACATCAGTAGTG
TTAAGGGTGCCCCAGAAACAATCAAATCGATGCTTAAGGATGTCCCTAGTCATTATGATC
ATGTTTATCTAACGCTCTCAAGGAGAGGCGCGCGAGTTTTAGCTCTGGGTTATAGAAATT
TAGGAAAATTGACATCTCAAGAGATAAGGGATTTATCCCGGGATGACATTGAATGTGACC
TAACGTTTGTAGGTTTCGTCATAATATCATGTCCATTAAAAACAGACTCAAAGAAAGCTA
TAGCTGAAATTGTTCACGCTTCGCATTCAGTCGTGATGATAACGGGTGATAATCCTCTGA
CGGCGTGTCATGTAGCCAAAGAATTAAAATTCACCCAAAAAGAGGAGGTTTTGATATTGA
CCGAGAGTGATGGGGAGTGGGCTTGGAAATCAATTGATGAAGAACTAAATCTTCCAGTGC
AACCGTCTCCGAAAACAAAATCGTTGACTTCGAAATTCGATCTTTGCATAACCGGTGAGG
GTCTGACTTTCTTGAATGAAAATCATCGTAAGTTTCTCCTCGAATTGATGCCGCACATCA
AGGTTTTTGCCAGATTCGCGCCCAAGCAGAAGGAATTCGTCGTGGTCACGTTAAAGTCTT
TGGGATATACCACGCTCATGTGCGGCGATGGAACTAATGATGTCGGAGCGTTAAAACATG
CTGATGTCGGAGTGGCTATTTTGGCTAACGCACCAGAACGAATCCGCGAGAAACCTCGAG
AGGAACGTCCTCCGGAGCCGGAGCGGGGGCGGCGCCCGAGGGACCCGCGAGCCGACGCAC
GAGCCGA
(2827 bp)

- SilkBase 1999-2023 -