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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp36033_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_calsyntenin-1_[Papilio_machaon]
Ontology
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007268 P chemical synaptic transmission
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0044331 P cell-cell adhesion mediated by cadherin
GO:0045211 C postsynaptic membrane
Transcript
Level		FPKM:23.34 TPM:21.61
ORF Entry
Sequence
(Nucleotide)
GGCGCCACGGCGTGCCCGTGGGCGTGGCCGCGGTCCGGCACTGATTCTCTGGCGACGTCA
GCCTTGTCCGCGATGCCGCTGGGTAGCTCCCGAGAGGCCACCTCGTTAGCGGCCGACATG
TGAGGGTGGACCACAGTTAAGGTTTGTACATATTCGTTGCTCGTGAATCGACCGTTGAGC
TCTGAGCAGGTCAGCTTGAACACGCGGTTCAGGTAGTAGGCCGGTTTCTTGTTGCTGTAC
TCGATTTCTCGGAGCACCTTCTGGTAGTTGTGGACGGTGTCGGCGCCGGTCAGGATGACG
CCGTCCCGAGTGACGGCCGCGCGGATGTCGTACCGCAACGGCAGGTCTGCGGCCGCGCGC
AGCGACAAAGCCTCGTGGTCCGGGTTCAGAGCCGGGTACACCGACACCACGCACGAGTCC
AGCTTCTGATTCTCATCGGCCAGTGGATGAGCGGGAGCAGCTCGGACGGAGACGCCGAGG
TCCGGGAACACGGTGAGTCCTGCGCGGAAGTGTGCGTAATCGCGCGCAACGTCCGCGCTG
CCGTTTAGCAGGATGCTGGGCGTCTGCGGCGCCAGCACCATGATGTAAGACTCTGCCGGG
CGGGCCTTGATGATGCGCCCGTTGTCGCAGGTGATGGTGGTGGCCACGTGCACATTCCTC
CTGCCCGGAGTGGGGAAGGCGCGAGCGTCTCCATACGCGACACGGCGCAGCAATGTTTCC
ACATCCGCCACTCCGTCGCCCTCCACCGACACCGACTTCAGATATAGGTCCGGTGCCAGA
CTGAGTCCCTCCCGGCAGCGAGCCAAACAGGAGAGCGCGTGCGAGGGTTGTGCGGCGCCA
CGCAGTACGCCCAGCCCCGCCAGCCAACCGCGGAGGTGGTGCTTCATATCCTTCTCGGTG
CCTTGCCAACAAGCGCCGACGACGAGGGTGGTGTTGACTCCATGCGCAGGGTGCAGGGGC
CAATCGTCAATAACTTCGGGCCCTTTACCGTCGAGCGAGCGGTAAGGTTCGCCGTCAATA
AACAAGTCCACATTGGGGAAGCGGATGTTCAGAGCGTAGTGATGCCATTCGTTGTCGCAA
ACCTCGGGTATCTTCCACCTCCACTCGGCAGGACGGAATATGTTGAGGTCTCCCTCGCCG
AAGTCCCGGCGCAAGAGCAGGATCAAACGGCAGTTACGGACGAACAAAGCGTAGTGGTGG
CGATTCATTTTGTGGTCATCGGCAAGGCACAGAACGTGTTCCTTTCTGTGCTTGTCGCCG
TCAGCGGGAGGGGCGTGACGCATCCACGTCGAGATTGAGAAGCTGCTGGTCAGCGAGTGA
GGCAACACCGACTCTGGAACTATGGCCGATGTTGTTTCGCCGTCGAATTCGAACATCTGC
TCGCCGTCACGACCTGAGTCGGGCTTCAATGATTTCGCCCATTCATTACCGGCTCCAGGA
CTCGGTAGCAGGTCAATTGTCTTCGGGTCGAGTCCGCATATGGTACGCTGAGAATGCAGC
GAATAAGTATCCCTGTCGCAGCCGCTGCCGACGCGCGAGGCCTGCAAGGAGACCGCAGCT
TGGATCCTGGTGACTCCAGGGCAACGCTCGTCTGAAGAACAGGTCTCCAGACGTGCGGCG
GGGAATAAGGCCAGTGGACCTGTTCCCGGCGCGTAATCTACACGTTCCGCTACTCCTTTC
CATCCCGCTTTGCAGGGCTTGTTGACTTTGATTGTGACCATAACTGGCGTCGACTGCATC
ATGCCGCAATCGTAAGCGACAACCGATAGGATGTGGTTGTGAGACTTTTCGTAGTCAAGT
GGCTCTGTGTTCCTGATCACACCTTCAACGTTGATAGTAAACGGTTGGCTCCTGTCCGTA
AGGATCTCGTACTTGCACACGTCACCATATCGCGGAGTGCAGTCCTTGTCAATGGCTTCG
ACGCGAAGGATCTCATCGTAAATGCGTCCCTCGTCGACGGTCTTCACGTACGCGGATTGA
CTGAAGACTGGAGCGTATTCGTTCACGTCTGTCACCGTTATGTGAACGGGGACAGTGTTG
GAATAGGAGCCGTCGCAGCCAACAGCGGCAATATCGAATTTGTAATTGCGTCGTTTCTCG
CAGTTCAGCGGGTATCGGACACGGAGGCGGGCTTCGTTTTCATCTATCACCATTATCTCA
AAAGGGGCCTCTCCATGATGTATGTTGTTTAGTATCAGGAAGGAACAGAGCGGTCCCCTG
GCACGGATCGGAGGAGTCACTTCGACCAGGGTCTCGTTCTCCTTGATCAGCCCATGATAA
CCCTCATCGGGCTCGTCCAACTCCAGATATGGGATTTCTTCGTTGTTGTTTCCCTCGGCG
CCGTACACCGCCGTCAGGAAAACTCCGACGCACAAAACGGTCAAGAACCTCACAATCATT
TTAAATGATTATTATCCAGCACTGAGTTCACAGTTTACTCGAAAAATAAAAATTTAAACA
CACGACATAATCAAACCAAAGACACCCGCGCTGCTCAGCAGCGATCGACCCTTCGCAAAT
GGCGG
(2525 bp)

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