SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp34844_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_thioesterase_otubain-like_[Amyelois_transitella]
Ontology
GO:0004843 F thiol-dependent deubiquitinase
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006508 P proteolysis
GO:0008150 P biological_process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0019784 F NEDD8-specific protease activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0043130 F ubiquitin binding
GO:0071108 P protein K48-linked deubiquitination
Transcript
Level		FPKM:34.67 TPM:32.10
ORF Entry
Sequence
(Nucleotide)
ATGGTAAGAAAATGTTTGATCACGCATACAATATATCATAGTGGCCAGGCCGGTAAAGTA
GATGGACAAGCGGAGTAGAACCCTCTGGAAAATCATGTGCTATCACCTGACTACCTTCAC
CCCGATCCATGTACTTCACTCGGACACACACCTTGAGTGCATTACTCAATGCTATGATAT
GGATATGGTCAGACTCTTTGTACATCGGTTCCACTTCCTGTCTACAAAACTCAGTAACAG
TGCGTGGTCCTTCAATAAAGTTCTGATAAAATTCTTGGTCTGTCTGCAGCTGACCAGATG
TAATAAGACGAAGGTACACCACTATGTAATCAGAATATCCCTGCTTGTTGAACTTATCAT
GAAGCTCCATACGAACTGTTTCTATCAAATCCGGAGTAGAACCAGCATGTTCCCCTACTC
TTTGGATTACTTCCATAAAAGTTTCGTAAAAATCTTCAACGGTGAACTGCGAAAACCCTA
AGGCGACGAGAATATCTTTAGAATTTTTAGCTATTTCGTAAAACTTATCATATTCCTGCT
TATCAGTCAGTAAGCGTTCCAAATATGCGTATGAGAACGCGCGAAAGAAACAATTGCCAT
CGGGACGCGTTCGTCTAATGCTTTTGTATTTCGAAGACAAATCTTTCACTTTGAGCAAAT
AAATCGGATCCTCGTTATATTCTTTCTCTAAAGTCTGCAATTCTTCAATTTCACCAACCA
GCGGTATTGTTTCCGATATCTCTTTTTCTATTTCACGTTGCTGTTTCATTATCAATTCAT
CTTGATTAATTGAATTTTCAACCGTATTACCGGTGATACCGCTACTGCTTGATGCATCAT
CCGCCATTTTCAAATAACAACTCCCGG
(867 bp)

- SilkBase 1999-2023 -