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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp29270_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		putative_signal_recognition_particle_54_kDa_protein_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005786 C signal recognition particle, endoplasmic reticulum targeting
GO:0006614 P SRP-dependent cotranslational protein targeting to membrane
GO:0008144 F obsolete drug binding
GO:0008152 P metabolic process
GO:0008312 F 7S RNA binding
GO:0016607 C nuclear speck
GO:0019003 F GDP binding
GO:0030529 C ribonucleoprotein complex
GO:0030942 F endoplasmic reticulum signal peptide binding
GO:0042493 P response to xenobiotic stimulus
GO:0045047 P protein targeting to ER
GO:0048500 C signal recognition particle
Transcript
Level		FPKM:63.43 TPM:58.73
ORF Entry
Sequence
(Nucleotide)
TTTTTTTATTTGTCATAGTTTTATTGGTCTTTAAAACACTAAAAGATTACATCAGTTCTT
ACGATTGCCTTAATGTCATTTGCCACCCATTAACCCACCCATTCCACTTGAGCCCTGTTG
TAACTGTCGCATCATATTGTGTAAACCTGACATACCACCCATTTGTTGTAGGAGGCGAGG
ATCCATCATCTTTGCCATTTGTTGGTTTAATTTAACCATTTGTGTTTGATTAACATTCTT
AGCCATATCTCCTCCTTTGAACAATCCTTTAATTCCGCCCATTTTTTTAACGACAGCCGC
AAATTTTGTGTATTGTGCAATTAAGTCTTTAACATCTCGTTCTGTGACACCTGCTCCCTG
TGCAACTCTAGTGATACGTGTCGGTTGTTTAGAAAACAACTTGGCGCCGTCTCTATTATC
CAGTTCACCTTCATTCATGGAGTCCATAATTGTCATAAGGAGTTTTAATTTGGCCATAGA
CTCTTGTTCACTTCCTTTTGACATAAGATCTTGTGAAAATCCAGGAATCATTCCCATTAT
TTGTGAGAAAGGCCCCATCTTCATTATATTTTGAAATTGTTCATACATCGCTCTGAGAGT
AAACTGCCCATGTTTAAGTTTTTCTAGTAGCTCATCATTGTCATCGAGTTTGAGTTCATT
AACTTTATCTAGGAGACCTTCAATGTCTCCCATGCCAAGGAGTTTCTTTATAAACGGTTT
TGTTTTGAAAGGCTCTAAGTCATCAATATGTTCTCCAGTACCAATGAATATGATAGGACT
TTGTGTAGCTGCAACAGCCGAAAGTGCACCTCCTCCCTTGGCATGTCCATCTAACTTTGT
AATGATAACAGAACCAATATCTACTTTGTCTTTGAAAGCCCTGGCTTGAGCTTCACAAGC
TTGACCAATTGTTGCATCCATCACAAAAATTATGTTGTCTGGTTTAATAGCTGTAGCAAC
TGCCAACATCTCTTCAAAAAGCGACTCTTCTTGCTTATGACGACCACTAGTATCCACAAT
AATCATTTCAAAACCTTGCTTCTTGAACATATCCACTCCAGTTGTTGCTATTACTACTGG
ATCCACCTCTGTGTAGCTTCCATAAAACGGAATTCTGGCTTTAGTACAATTCTGTTTGAC
TTGATCATAAGCACCAGCTCTGAATGTGTCAGCACATACCAAACATGATTTCCAATTCTT
ACGTAGGTAATGATATGCAAGTTTTGTACATGTTGTGGTCTTTCCAGATCCTTGTAATCC
CACAAACATTATTACATTAGGCTTCCCTTTGACAGGCTGGTATGGTTTAACCCCGGGATC
TACAAGCTTGACTAGTTCTTTGAAAACCGCAGACTGAATCATCCTTCGCTTATTAAGTCC
ACCAGCCATTTCATCAAAATCAATGACAGCGCGAACATTTTCTCTTAAGTTTTTTACAAG
GCGGATATTTACATCTGCTTCCAATAATGCAGCACATATCTGCTTCAGCATAGAATTCAA
TACCTCTTCATTTATAATAGTAGCCCTGCTCAACGACTGCAAAGCAGTGGTTATTTTACG
GCCTAAATCTGCTAAAACCATTTTGGTTAAGTTTTAGGCTATCAAAAGGAATTATTTTTG
CCAGCTGTTGACACTTATAACTTGCAAATAATTATAGATATTTATACGAAAACATAGTAG
TTTTTTCGTACATCTTAATAATTATTTTAAGCAAGCATAAAAAAATATATTTTCAGTTTA
TTTGAGCTTTGCGGTAGGTAATAAAATTAAAATTCTAAGTTCATTTTTCTTGTACGATTT
CACTATTTGACGCAAGGCTTACACGTTTGTTG
(1832 bp)

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