SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
NameA_BomaMG_comp26224_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)
PREDICTED:_collagenase-like_[Papilio_machaon]
Ontology
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0030574 P collagen catabolic process
Transcript
Level
FPKM:131.79 TPM:122.04
ORF Entry
Sequence
(Nucleotide)
AATTATGATTTAAATTACGAGTATTCACGATAAGATATTATTTCATATAAAACAATCAAG
TGCACGTCGACTTGTCATCTCTCAGGATTTTCACTATGAAGGTGTTACTACTGATTTTTT
TGGGCGCGGTCTCGTTGGCGTCAGCGGGTCTTCTTCCAGCCATGCTGCCCTACCATGATA
CGGTTGGAATCCCTCTGGCAGAAAGTCTCAAGAAATCGGAGGAAGCCCGAGACTTTGATG
GATCTAGAATTGTGAATGGAAATCTTGCTCGTTTGGGTGCTCACCCGTACATGGTCGGTT
TAGTCATAGAAATACGGGGCAGTGCTAATTCAGTATGCGGTTCATCTATGCTTAGTAATA
CGAGGTCTCTCACAGCTGCTCACTGCTGGTTTGATGGATTTAGACAAGCATTATCTTTCA
CAATGGCCTTTGGAACAACCACTGTCTTTGCTGGAGGTGTTAGAGTGCGCACCACAAACG
TACGGATGCATGAAAATTGGAGACCAAGAGATGCAATCAACGACATAGCCGTAATTACCC
ACAATCGGGTGGAATATACCAATGTGATTCAGGCAATCACTTTACCATCTGGATCTCTTC
TTAACAACAATTTCGTTGGGACCTCGGCACAAGTTTCTGGTTACGGAAGAACCGGTGACG
GTTCTCAACACAACATCAGACCAGATCAAGCGATGAGAGTGGCAACCGTCCGAGTTATTA
GCAACAATGAATGTAGAAATGCTTTTGGAGCTGTGGTCCGGGATACTGTTCTCTGTACAA
GCGGATCTGAAGGTCGTAATATCTGCAGCAGCGACTCTGGCGGACCTTTATCCATTGTCA
ACAATAACAGGAGAGTGTTGATTGGCGTTGTAATGTTTGGACATCCTCGGTGCGAGTCTC
GTAACCCTGGCGGGTATTCTCGCGTCACTGCTTACAACAACTGGATCCGGGCTAGATTAT
AAATTATAATAGAAAATCATGAATAAACATGTATGAATAAGTACATGCGATTGCAACAAG
CCACAAAAGTATTTTGCATAGAGTCTCCAGCTTTTACCTTCAAGTTTTCGATTACGTATA
AACGTACATACCTATAAAAAGTAACTGATATAGTGATCATGTTACAAAAATGGGCATTTC
ACCCCAAAACTTCTTGTCGTTCGAAATACCATTAGTTTATATTAACTCGTCACTACATTG
TTCAGCTAGGACCCTAACATTTATGAATAACATTCTTGAACACAGTTGCGATGGTAAAGA
TTTATCCATGCAGAATCGAAATGTAAATCCTTAAAAAGTCAAACGATACAGATCGGGTAC
GATCGAATTTTTAGTGTCAAACTATTAGGGACTGCGAATACATCAATCAAAGCACCACAT
AGAGTGGAGGATAAAGGCCCTGATTTTCGGTAAGCTCAAAATTTAACTATTTATTTTCTA
TTTTGTTTTGTAGCCCATGTAAACCAATCAGCGGAGAACCATAGAAACTGAGTAAGTATA
AGACGAATCAAGGTGGGAATGTTGGCAGTCGGGTGTTCTCACAGATTGGCACTTTTAAAA
CAATTATTGCAAATATAATATCTTCTTTATCGTTCCCTCGCTGCTGAGGATCGCGAGCAC
ATTTGACGTTCCGTCACAGTGTTCGATCATGGGTGGCATGGACCGAATGGTACAGACCAC
CAAGTGCTTCCTTTAGTAGATCTGACCATCTGGCTGGCCCATGGCGCGTCTGCCCTCTGT
GTTACCCAAATTTATGAGATTTTCTAATTCACGTCTGGGAGACCGCATGATTTGTCCGAA
GAATCTCATAACACGTTCTCGGCAGATGGCAGAGAGCTTTTTTCAGATATTTAGCTCCCT
TAGAATGGACTAGTTAGTCCTCATGGCAGTCCACGGTATTCGTAGCATCCTCCGCCACAC
CCACGTTCAAAGTCTTCGATATTTTTGCTATCGCGGCTTTTCTTGCACCATGTCTTCGCT
CCGTAGAGGAATATGGGAAAGACCAGTGCTTGCACCAAGCGCAACCAAAACCAAAGGTTT
TATAGCGAATGCTACGATTTTTTTTCCATATTTTCCCGAGGTTGGCCATTGCACTTTTAG
CCATACTGGATCTCCGGGGTATTTCTCCTGTGCAGCCACCCTCGGATGTTATTTGCAACC
CAAGATATATGAAATCTACTACTTTCTCGCAGCCGCTGAGTACATCAGAACGTGGAAGAA
GTTGCGCTCTATCTATTAACATTATTTTGGTCCTCGAATGGTTCTCTTGATGAATGATCT
TAAGACCAAGCTTAGCACTTTCTTCTTCTTCTCGGTTCAGCAGAATTTCCATTCCCTCTT
CACTTGATGCAAGTATGGTAGTGTCTTAGGTTCGTGAGTGTTTTAACGCCCATGAAAATA
TCGCCGGTCCAGCCTTCAAGCACTCTCCTCATTACATATTGGCCGTAGAGATTAAATAAT
TTGGGCGACAAAATGCAGCGCTGACGCACTCCACGTTCTTTATGGAAGGATCTTCTGTAT
GGATCTTGGATTATCCAGTTTTACGAAGCAAGAGCCATCAAGGTACAGATTCTGTATCAG
TACTGTTGTTCCGAGTAATACATCACCTCTAGTGGTATAAGCCTTAACATTCCAATCGCC
GCACACCTCCTTAGATGGAATAAAGCGCAACAAGATGCCCAAATCAAAATAGAATCGGTC
AGTTCAAATTTCTTCCGATTGGGAGGTTGGTGCATACACCTGAATAATGTTGATCACTTG
GTGTTTTGTATCCTAACACGCTGTTTTCATGTTTCTGTGGTAGAAGTATCACAACACCGT
TACCACCACGATTTTTAGCTCCAGAAAAGTACAAGATGTTCCCGTTAGTAGTTTTTATAT
GACCGCTGCTTCTTCTATATGCTTCACTTGGCCCCGGTATGTCGATTTTGCACCTTAACT
TCTCCTTCTCGATGACTTCTTGCTTACCCGGTTTCCGCATTCCTCTCACATTCCAAGTTC
CTATACGTAAATATTTTCTCACTTGGGTTTTACTCTTGCCAGTACCATCACCAGTTGCAT
ACTCCCCACCATGTGACCCGGGATCACTATGGCGTCGAGGGTCAGTTGGATTGCGTGACA
TAATACTCCAACTAAGTATTATATTCGTGTGGTGTGGTCAAACATAATATGCAAGTATTT
CATTTTTAAAATTTTAAAATAAAATTAAATAGATTAATTACTGTTACTAGAATTATTTAG
AAGTACCCTGTTACAACTATTCTTAAATAATAGATGCTCTTAAACCAGCACCCGATACCA
ATTGGACACAATTTGACTACAAATAATTACTTTTTTAATTTTCAATAGTTTTTTTTATTG
CATAGAAGGGTGGACGAGCTCGCAGCCCACCTGGTGTTAAGTGGTT
(3406 bp)

- SilkBase 1999-2023 -