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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25831_c5_seq29
Scaffold_id
NCBI non-redundant
(nr)		ring_finger_protein_5_[Bombyx_mori]
Ontology
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006914 P autophagy
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0036503 P ERAD pathway
GO:0036513 C Derlin-1 retrotranslocation complex
GO:0044390 F ubiquitin-like protein conjugating enzyme binding
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
GO:1904264 F ubiquitin protein ligase activity
Transcript
Level		FPKM:0.81 TPM:0.75
ORF Entry
Sequence
(Nucleotide)
GTGTCCCTACTATATAGGTCTATGCTGTTATATAATGTAATTTCGAAAGAATTATGCAAA
ATTAAAGCTTATTTAACGAACATGTTGCATCTATTTTAAATAAATAAAAAAACAAGTTTC
AATATTTTGCTAGTATCATTAATAATGTCATCTACTACTACAACACCATCTACACGTGCA
TCACCACCACCACCACCACCCCCTCCTCCTCAAACTTCCTTAGTTAATGTGAAATCCTCT
GATTTAAAAACAGTTTCAACAAATAATGATTTTGTTCATTTTAATTCCTGCCAATGGGCT
GCACACTATCCAGAATTGAGAGAAGCATGTACAAAGAATAACTTATTCTTAGAGAAGGAA
CCTTTTAAATACAAATATAAATACATTGAGTCAGTACTTCAAGTTGGGCCCACATGTGGA
CTTGTTGCACTGTCAATGTTAGTTGATAGTAAAGTTACTGCCAATGAAATGTTGAATATT
GCAAAATTATCAGGCTACACTGGCAATGGTGAAATGTGCAGTTGTAAGAACATGGTCAAA
TTAGTTAAAGAAGTATTCAATTTAGCTGGAATAAATAATGTGACCTTTGAATTGAAAATT
GGTAACTTATTTAGCAGTGAAACAATTGAATTGTTAACGGATGGTGCAATTATATTGGTG
CCATATGATGCTGATTGCAATCACTCACCGTGTCTACGTAATGGTCACACGGCACACTGG
GCTCTCATCTGTGGAATCCTTATTGAAAATCCTACTGAATCTTTTGAATTAAATGACAAC
AATATTTATGTATTATGTAAGCATGGAAAGTCTAAGTATTTAGCCATTTGGAAATTAGCA
GATTTAGACAGCAGTAATACGAATCTAAAAGAATTTTCTCCAAAGAAGGGAACTGATGGT
TCCACATATGTTCTACCTGATGGCGGAATTGGCGGAGAAGACGGTCTCTGTAATCAATAT
TTAGTGTTTAAAGGATTAAACCCTAATTAGCTGACTAAGACAATTGTGTTGGATCTTGTT
CAGGTTCAAGACAACTTTGAAAGGCAGGACAGCTTAATGTCTCAATCCATTCACATCGTT
GTATCTGTGGGTTCCAGTATTAGCTTAATGTTAAATAGGATTTGACGACTTTCCCTCATA
GTTATAAAAATAGTAAGAGAAAATTATTAGATCAACAATATACAGTCAAACCTGGTTAAG
TGAGAACTGGATAAGTGAGAAAACTCTATAAGGGAGAGTACCCGTCATTTTAAGCTCCTA
AAACCTCTATTAGAGAGAAACAGAAACCTCTGTAAGAGAGAGTCGTTTTTCCCTCATGGA
CCTCCGTAAGTGAGACTGCTACTTATCTATACCTCTATAAGCGACAGTCGAACTTTATTT
ATTTATATTATTTAGGAGGAACAAATGACAAAACAAATTACAAATTTAACATCTGCTATT
TTATGACTCATTCTTAACTTTCGTGGAACTTCCTACCATTGTTTTTGTATTGTTTTCTCG
TCAATATTGAAACTATTCTATTTAATGGAACTAAATAACGTTGTTATTTTATCGCATTCT
TTTCGAATGGACACGTGTGCCTGTGTACCGTCCTGTTTGTCGGACTTACTCCGTTTATCG
TTAATTAATTGCGAAGGAAAGTTCTGTTCTGTATCATGTCAAAACGGAAAATCAAAGTAC
TGCCATTAAGTGATACACTTAAAATAGTGAATGCGTTTGAATCCGGAAAATCGCGAAATG
AAATTCAGAGGGAGCATTAGCGAGAAACTCGGGTTAGTGAGAAACCTCTATAAGCGAGAA
TGAGATTGTGCTCCCTTGAACTCTCGCTTATCCAGGTTTGACTGTATACAGATAAAAGGT
TCGGTGTCTTTAATTAAATAACCACGACTTGATCTGTCACTGTCAACAAAACACTACCGT
AGTCACAAGAATCAATTTTGAAAAGAACTTTAGAAGTATTGTTCTATTAAATAAATGTTT
ACAGAGTTATTTAGTATTGTAACCTGGTGGCAGTACTTGTGGGCGGTCAGGCGAACACCA
GCCACAGCACGAACAGGATCGCGACCCACAGGAATATCTTCGATAGGAACTGCTCTTCTT
CGAACTGGGCTGTGCCGCGCGGCGCGGCGCTAGGCCTTGGATCACCAAAATTAAATGTCG
AGGTGAAAATTCCAAACGGGAAGGCTCCTATCCCGAACGACATGTGGAATCCCTCGCCGA
AGCCGAAACCTGGGAAGCCGCTCGTACTCTCCGGCTCCGTGCGCTGTCCTGCCGGCCGGG
GGGGCACCTTGTTTCTTGGGTCTTCCTGTTTTGTGTTTCCTCTTCCATAGAGCGGGATCA
CTTTCTCTCTGCTGATGGCGGCCTTGCAAACAGGACAGACTTGCCGACTGGGTCTGGTTT
CCAACCATTGATGTAAACATGGCCAGCAGAAGAGGTGGCCGCACATACTGACGACTGCAT
CACGGGCTGTGTCCAGACAGATGTTGCATTCTAGCATTCTTTCGTCATGTTTGTCTTCTT
CGCCACCAGCGTCGCCCCCAGGCGCCGAGGGGCTCGCTCGGGCTTGACTAGTCTCCGCCA
TTTCCCACTTTAAATTTGATGTTTGAGTTTATTATTTCATATAGAAACTTGTTAATAAAT
AAATAAATCACATTTCCAATCCCGTGGTATGCTGATTGCTGATCTGTCAG
(2690 bp)

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