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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25785_c7_seq19
Scaffold_id
NCBI non-redundant
(nr)		transcription_elongation_factor_B_polypeptide_1_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0030891 C VCB complex
GO:0032403 F protein-containing complex binding
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0070449 C elongin complex
Transcript
Level		FPKM:20.99 TPM:19.43
ORF Entry
Sequence
(Nucleotide)
AATGCCGAATTATGCTGAAGCTTAGTTGAGCATTATGCCGCATAATGCGCTCTTGTGCTG
TAATTGGAAAACGGCCATTACTGTGATCCTCTAAGCTTTTCTCTTAATTTATTGGGTTTT
ATGGGAAATCTGAAATTTAACGGCAGCCTTATTGTCCAGAATCATCTGATTTTGACATTT
GATTGGCATTCATAAATCTGCATTAACTTCGAATATTTTCATTTTAAATAATTTTATTGT
TTTATTAATTTTTATCTACGTTATGTAACATACTTTTTAGAATTCAGCTGACGCGCTCTA
TCCGCGATCATAAGAAGAAACAGGCGAGCGTCCGTCAGCTGCCTTAGCTCTACATTATCA
TAAGTAAACAAGTATCTGTGCTTAGCTTGCGTTTACAATAAAGTAGCTTAGAAACTTATT
TTCATTTCGGATTCGGCGGTCCCATTAACGTTTGTATTCGTTTCAAAGTAAGTACCGTCC
TTTTTAATGAACTTTTACTTTTTGCATTCTTTATGGCTACATTAATGAAAGGTCATCTAC
AATAAATGAGACACAAGAAACTCGTAAACCGTCTTGGTACATAAAGGATTTTATTGGTAA
TACTCAGGAAATACTGTAAAAACACTAAAATTATTTATTTTACATAATTCATTTTGTATT
AGTTATGTAAACACTTTATGGTTATATGTAAAACTTTCATTTTCAATGTAGCCATAAATT
ATTCGTAAATATTTAAAATTAAACGTATTTATGCTCCTAAATGTTATGAAAAAGGATATA
AAAACCACATCGTTGAGGTTGTTCACGTTTCAAAGGTTTACTTCTATAGACCTTACAATG
AAAAACAAAAAGCTATGTTATAGATGAGAGACAGTGTAGATGTGCATCAGGAATTATTGT
TATATCTCTTTCATTTTAATAATACGCAATGTGAATACTTTTTGTTATTTGAATACTAAC
AATAACCCCCCACACACACCCCCTGTCTATTTTTGATTTCCCACTGCGAACATATTTAAT
AAACCATTTTCATTTATCTGAACACTGCTGTTAGCTAATTTAAATTTGTTACATCAATAA
TTGTAGAAGCACAATATATAATATAATCAATTGTAAATTAAACGGACAGCAAGAAAAAAA
TAAAAACAAATAATCGTACGCACACTTACGTACAATTTAGAACTAACACAGATTATTTGT
AGGCGTGTTCGTAATATTGCACTTTTAACATTATTCAAATATTAGAACATGTTAAAATTT
TGCACGTGAAATAAACAACTTAATGCAATGAGAGATAACTTTATAAAGGATAAGAAAAAA
CATCATAGTTAGTTATCCGAGAGAATGACACATGCATTTGTAGTTGCAAATATTATTAAA
CTACAAATAATGACTTAGAGAGGCCGTTCACCTGAATTAGCTTGGCCGGAGCTTGTTGAA
AGATTTTCCTTATCCAAAGTTTCTTGATGTCTCTGGACAGTTATATAATAATAGCACTTT
ATGTCTTTGGCAAGAGCATTCATCCGGCAATATCTGATACTGTGTTTCTCTCAATAAAAT
CATTTATCATCAGTTTAATGTTTCGATTTTATTTATATTGTTACTAACAAATCTAGACCA
CATTCACAAAACAAATCTTCACATAATACAATACAATAGTATTTGAGAGCAAAATTTATA
TTTACCGTTTAAACTCTAGACCTATTTACATTACCAATTCATCGTGTGACATATCTGTGG
TTTATCTCTCATTGCATTGAGGCAATGTCGTTGTCAGAATTCATCGTTTAACAGTCGAGG
AAGTTGGCAGCCATCAACACTTCGAGGGCGATCTCGGGAGCGATCGGAAACTCTGGTATC
TCTGTAGACGAGTTGGTATAGCGTACCTTGTACGTGAAGTACATGCAGACTTTTTGGAGT
ACGTGTGATGGTATCTCTCTAAAGTTGACCTCGTTAGCTTCATTTTCAGCAAACTGGCCC
GGTCCGCTGAGCATAGCCTTAATAGTGCCTGATATAAGAGCATGCTCCCTCTTCACAATG
AACTCGTGTCCATCAGAGGATACCAGTTTCACGTACATAGCGTCTGGACCTTCACATCCT
CCATACACCTTCTCTTCACCACCGATACTGCCAGATCCACTAGCTGAATGTTGTTCATCA
GCAACATTAGTTACAGAAGGTTGCTCGGACATTTTTCACTGAGGGATTTCTTGCTTAGGC
TAATGTGGAGTTGTTTATGTAGGTAGGTAAGAGGTATTAGTAGCCTTTTACTATAAAGAT
GAAAATACTATAATCAGTAAATATTTCTAAATATTGAAAGGAACAATTTTTATTTTTATA
GGTTAACAACCCAGCAGAATCAAATTTTGACAGGACTAAAAGTCGGTCTGTCAGATTTGA
CAGTAGCAGTAGTGTTCCGTTATACCAAA
(2429 bp)

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