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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25785_c7_seq10
Scaffold_id
NCBI non-redundant
(nr)		transcription_elongation_factor_B_polypeptide_1_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0030891 C VCB complex
GO:0032403 F protein-containing complex binding
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0070449 C elongin complex
Transcript
Level		FPKM:1.96 TPM:1.82
ORF Entry
Sequence
(Nucleotide)
GTCCAGAATCATCTGATTTTGACATTTGATTGGCATTCATAAATCTGCATTAACTTCGAA
TATTTTCATTTTAAATCATTTTATTGTTTTTTAATTTTTATCTACGTTATGTAACATACT
TTTTAGAATTCAGCTGACGCGCTCTATCCGCGATCATAAGAAGAAACAGGCGAGCGTCCG
TCAGCTGCCTTAGCTCTACATTATCATAAGTAAACAAGTATCTGTGCTTAGCTTGCGTTT
ACAATAAAGTAGCTTAGAAACTTATTTTCATTTCGGATTCGGCGGTCCCATTAACGTTTG
TATTCGTTTCAAAGTAAGTACCGTCCTTTTTAATGAACTTTTACTTTTTGCATTCTTTAT
GGCTACATTAATGAAAGGTCATCTACAATAAATGAGACACAAGAAACTCGTAAACCGTCT
TGGTACATAAAGGATTTTATTGGTAATACTCAGGAAATACTGTAAAAACACTAAAATTAT
TTATTTTACATAATTCATTTTGTATTAGTTATGTAAACACTTTATGGTTATATGTAAAAC
TTTCATTTTCAATGTAGCCATAAATTATTCGTAAATATTTAAAATTAAACGTATTTATGC
TCCTAAATGTTATGAAAAAGGATATAAAAACCACATCGTTGAGGTTGTTCACGTTTCAAA
GGTTTACTTCTATAGACCTTACAATGAAAAACAAAAAGCTATGTTATAGATGAGAGACAG
TGTAGATGTGCATCAGGAATTATTGTTATATCTCTTTCATTTTAATAATACGCAATGTGA
ATACTTTTTGTTATTTGAATACTAACAATAACCCCCCACACACACCCCCTGTCTATTTTT
GATTTCCCACTGCGAACATATTTAATAAACCATTTTCATTTATCTGAACACTGCTGTTAG
CTAATTTAAATTTGTTACATCAATAATTGTAGAAGCACAATATATAATATAATCAATTGT
AAATTAAACGGACAGCAAGAAAAAAATAAAAACAAATAATCGTACGCACACTTACGTACA
ATTTAGAACTAACACAGATTATTTGTAGGCGTGTTCGTAATATTGCACTTTTAACATTAT
TCAAATATTAGAACATGTTAAAATTTTGCACGTGAAATAAACAACTTAATGCAATGAGAG
ATAACTTTATAAAGGATAAGAAAAAACATCATAGTTAGTTATCCGAGAGAATGACACATG
CATTTGTAGTTGCAAATATTATTAAACTACAAATAATGACTTAGAGAGGCCGTTCACCTG
AATTAGCTTGGCCGGAGCTTGTTGAAAGATTTTCCTTATCCAAAGTTTCTTGATGTCTCT
GGACAGTTATATAATAATAGCACTTTATGTCTTTGGCAAGAGCATTCATCCGGCAATATC
TGATACTGTGTTTCTCTCAATAAAATCATTTATCATCAGTTTAATGTTTCGATTTTATTT
ATATTGTTACTAACAAATCTAGACCACATTCACAAAACAAATCTTCACATAATACAATAC
AATAGTATTTGAGAGCAAAATTTATATTTACCGTTTAAACTCTAGACCTATTTACATTAC
CAATTCATCGTGTGACATATCTGTGGTTTATCTCTCATTGCATTGAGGCAATGTCGTTGT
CAGAATTCATCGTTTAACAGTCGAGGAAGTTGGCAGCCATCAACACTTCGAGGGCGATCT
CGGGAGCGATCGGAAACTCTGGTATCTCTGTAGACGAGTTGGTATAGCGTACCTTGTACG
TGAAGTACATGCAGACTTTTTGGAGTACGTGTGATGGTATCTCTCTAAAGTTGACCTCGT
TAGCTTCATTTTCAGCAAACTGGCCCGGTCCGCTGAGCATAGCCTTAATAGTGCCTGATA
TAAGAGCATGCTCCCTCTTCACAATGAACTCGTGTCCATCAGAGGATACCAGTTTCACGT
ACATAGCGTCTGGACCTTCACATCCTCCATACACCTTCTCTTCACCACCGATACTGCCAG
ATCCACTAGCTGAATGTTGTTCATCAGCAACATTAGTTACAGAAGGTTGCTCGGACATTT
TTCACTGAGGGATTTCTTGCTTAGGCTAATGTGGAGTTGTTTATGTAGGTAGGTAAGAGG
TATTAGTAGCCTTTTACTATAAAGATGAAAATACTATAATCAGTAAATATTTCTAAATAT
TGAAAGGAACAATTTTTATTTTTATAGGTTAACAACCCAGCAGAATCAAATTTTGACAGG
ACTAAAAGTCGGTCTGTCAGATTTGACAGTAGCAGTAGTGTTCCGTTATACCAAA
(2275 bp)

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