SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25775_c5_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_DEK_[Papilio_machaon]
Ontology
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007165 P signal transduction
GO:0016568 P chromatin organization
GO:0019079 P viral genome replication
GO:0042393 F histone binding
GO:0043292 C contractile fiber
GO:0044822 F RNA binding
GO:0045815 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:2000779 P regulation of double-strand break repair
GO:2001032 P regulation of double-strand break repair via nonhomologous end joining
Transcript
Level		FPKM:32.97 TPM:30.53
ORF Entry
Sequence
(Nucleotide)
CCCCCGCCCGCCCCCACCTCCACGCCCGGCGGCCGGCCCCGGAGGTCCGCCGCCGTCAAG
GTGCATAACAGAGGTTACTCTGATGAAGAATATGAAACTGATCCAGAACCGAAAGTCAAA
GGGCCGAAGCCCACTAAAGAAGGTTCCGAAGATTCAGACGGTTCATTCAATCCGAGTGGC
TCGGAGGAGGCGGATTCGGACTTTGATCCTGAAGCCGGTGAGGGCGTCGCGAAGAAACGT
GCGCCGCGGAGACGATCCGCCGGGAAACCCACCAAACGGTCCTCCAAGAAGGGCAGCAGC
AAGGGGAAGAAAGGAAAGGCTAAACCGAGTCGCGGCAGACGAGCAAAGTCCGAAAGCGAC
GAGGAAAGTGAAAAATCTGAGAGTGAAAGCGACGCAGAGTCCGGTAGCGACGGAGAGGAA
TCAGATGAGCCTAAAGCGAAGCGAGGACGGCCATCGGTGGTAGCTAAGGGACGCAAGGGT
CCGGTCGCAAAGAATTCTAAAGCAACGCCCGTAAAACGGAAAGCACCTACGCCACCTGCC
AAAAAGAAAGCAGTAGCTGGTAAAGCCGCAGCAGGTCGGCCAGCCAAGAAGGGGAAGAAG
GCTTCGTCCGACGAAGAGTCTGGCGACGGAAGCGAGGAGGACGAAGACGAGGAGGAGGCC
AGCGACGACGAGAGCGGAGACGACTCGGACGCGCCGACCGACAAGAAGGCTAAACGACCG
CCTACTGATGAAGAGATAAAGAAGTACGTGAAGCAAATCCTGGAGGGCGCGAACCTCGAG
CAGATCACTATGAAGACTGTTTGCAAGCAGGTCTACAGCCACTACCCGGACTTTGACCTC
GCGCACAAGAAGGACTTCATCAAGGCCACGGTCAAGTCGTGTATTTAAGATGTTAGGAGT
TAAGGGAGCAGTGTAGATGTCTACATAGTATACCTATAGTTTATAAAGGACATAGTTATA
TATTATTACAATAATAATATATTATGAAAATAAAAGTTTAATTAAAAATAATAATAAAAA
AAAAAAACAATAAAATGAAATAATAATTGTATACGTAAAAAAATATATTTGTCTGAATAG
GCTTTATTATTATTATTAATAAAGAAAAAAGCTATGACAAACTCAAATTTTGTTTTGTCT
ACCATTATAATAAACTAATTCCGATGTAGTTGTTTCCCTAAAAACGTTTTAACTGTGTAA
GCAATTAATGTGAACAAGTAAGTAAGTCGATCACGTTCCATTGTGACTATCACTAATTGT
ATGAAGAATTGCTAGTGGGTTTGCCAAGAATTTTCTTTCAGACGACGAAAAAGAATTGTG
TCGAAATCGATCGAACCGTCTACAAAAGATACTACGCTATACATGTGTCGATTGATTTTT
TTATTTAGATTTGCGAAATGAAACTTTTTTTGATATAATCATGTGCAATTTGTAAAGAAA
GTTACAGTCCTCGGCAATAAATATTGCAAATCGATCTACAGAAAGAGAGAATCGGCTAAT
TTCGGCTTCATAGTGGTATCTCTATCGCACATTAGCTGTGTGACGTTTATTATTATTTAT
TTTTATTTTTATTGCCCTTGTATACAGACTGAAGTCGTCGTGGCCTAACGGAT
(1613 bp)

- SilkBase 1999-2023 -