SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25774_c5_seq5
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_exostosin-1_isoform_X2_[Papilio_machaon]
Ontology
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0006044 P N-acetylglucosamine metabolic process
GO:0006486 P protein glycosylation
GO:0007224 P smoothened signaling pathway
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0008101 P BMP signaling pathway
GO:0008354 P germ cell migration
GO:0008375 F acetylglucosaminyltransferase activity
GO:0008589 P regulation of smoothened signaling pathway
GO:0015012 P heparan sulfate proteoglycan biosynthetic process
GO:0015014 P heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process
GO:0015020 F glucuronosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030210 P heparin biosynthetic process
GO:0046872 F metal ion binding
GO:0048312 P intracellular distribution of mitochondria
GO:0048488 P synaptic vesicle endocytosis
GO:0050508 F glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity
GO:0050509 F N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity
GO:0050808 P synapse organization
Transcript
Level		FPKM:8.01 TPM:7.42
ORF Entry
Sequence
(Nucleotide)
AATACAAAGTTCATACTTTGTATTGTAATACACTGTTATATTACTTGACAGAGATTGACT
TACTTAATAATATAATAATTTTATTTTTTACTTAATATAATTTATTGTGGGATGAACGGA
TTTCATATGGCGACTTAGACTGCAAATTGAGCTCGACAATAATGTTAATATACGAGAGCA
GTAGATGCATTGTTTCGGCGCGATATCCTCAAAGTGCATCCAAGGAGGACTGTACTTTCA
TTTAGACGCCGTTATTTCTTTCACTTATTAAACACGCATTAAAACAAATAATAAAACTAT
CTTCAAACAAGTGCTTAAGTAATTCAAATACAAAAATTAATATGAAATATTACTAAACAA
TTACGAGCGACTAGCGATTTTACAAAAGTTGCGAATAAAAAATTAAGTAAGTACTTGCGG
GAAACTACCGGCTGGCCGCATGAAAAATATAAACACAAATACCTATATTAAAATTCAGAC
GTACCATAGGTATAAAAATGTACCTAGCGGCCAGGACATACGGTTCCAAATCACTAGGAA
TAATTCCGTGTCGCTTGCTCATTTATTTTGCGTCGATCGGTCTGTCTCGCTCGCTCGGTT
CCGTTCGTGTATTAAGCAACATTACACGACAAAGAAAGAAACATGTTGGGTGATGGTGTG
ATGTTTGTTTCCTTCGCGTAATGTGTGATGTTGCATTACATCGTAGAGTAATATTACCCG
AGTAATATCACTCGCATTACTTACACATGTCTAATATATTTCCCATTTATTCGTTTATAT
AGTTTTTAACAGTTTGAGACTTGTCTGGGGTGAAACAAATTTTGGTATTTATTTCTACGG
TTGTGAAATGCAAGCGAAACGACGATACCTACTACTTTTCATGTCTTGTGCTTTTCTTTT
GTATTGCTACTACGGAAATACTAGTTTCAAGTCAGACACTTGTAAATCGAAATTAAATGA
ATTGCCATCTTTTGCAACACTTGATGATCTGCACCTTAAACCATCTAGACAAAAACGCAA
TCCTGCTTCTGCAACACAGCCTTGTCGTATGGATACATGTTTCGACTTTTCTAAATGTGG
AAGTGATCCAAAAATTTTTGTATACCCAAGTGATGGGACTGTCAGTGCTTCATATAGGAA
GGTATTATCAGTAATAAGAGAGTCCAGATATGTAACTAGAGATCCAAATGAAGCATGTTT
ATTTGTGCCAGCTATTGATACACTGGATGCTGACCCCTTGTCATCAGAACATGTATCTGA
TGTCGCTTCACGTCTATCGAGATTACCTTATTGGAGAAATGGTAGAAATCATCTCATATT
TAATTTATATGCTGGCACTTGGCCAGACTATGCTGAAGATTCTTTGGGATTTGACCCAGG
TGAAGCTATATTGGCCAGAGCAAGTGCTTCCGAAATAATGTTTCGTGAGGGATTTGACAT
TTCATTGCCATTATTTCATAAAGAACATCCAGAGAAAGGAGGAGTTCCACCTGCTGCTAC
TGTCAACCCATTTCCGGCTCAACGTAAGCATTTGGTAGCCTTCAAAGGAAAAAGATATGT
ACATGGTATTGGTAGTGAAACCCGTAATTCTTTGTGGCATTTACATGATGGAAATAACTT
GATCTTAGTAACCACTTGCCGTCATGGAAAATCTTGGAAAGATTTAAGAGATGAAAGATG
TGAAGAGGACAATAAAGAATATGACAAGTTTGATTATGAGCAGTTGTTAGCTAACTCAAC
TTTTTGCATTGTTGCACGAGGAAGACGATTAGGATCCTACAGATTTCTTGAAGCCTTAGC
AGCTGGATGTATACCAGTTTTGCTAAGTAATGGATGGAGATTACCTTTTGATGAAAAAAT
AGATTGGAGGCGTGCAGTTATTTGGGCAGACGAACGCTTATTATTACAGGTTCCAGAGCT
TGTACGTTCAGTACCACCGGAACGCATCCTTGCACTGAGACAGCAAACTCAGTTTTTATG
GGAGCAATATTTTTCATCAATTGAAAAAATCGTCTTCACAACTATTGAGATTTTACTGGA
ACGTGTTCTCGCTCATCGAGTTTCAAAGCAACGAGATCTTCTAATTTGGAATGCTTCACC
AGGAGCCCTCGGAACACTGGCTGCATATGGCGATTCTAGATCACATTACCCTATTCCATC
TCCTGTATTAGAAGCGCCCTCGGCTCCTTTTACCAGCCTCGCCCCTCTTCCTGTTCCATC
AATACCTCAAATGGCACCTCCTCATACTCCTGGTAATTCTTTTACTGCACTGTTATATGT
TCAAGCAACATCACCAGCTTTACACAAACTCCTTGCTAATATTGCCAGTAGCGAGTTTTG
CGAGAAAGTAGTTCTAGTATGGGACAGTGAACGGGCTGCGCCTTCTCTGAAGTCTTTGTC
ACGTATGGCTGGAGACAGCCGGGATCCACTCCCAGTAATAGTTGTCGACGCTACCACTCA
CTACCCTGGTGAAGGTGTTTCTGCACGATGGCAGCCATTGTGGGCTGTTCCGACCGCAGC
TGTGTTTTCATTAGACGGCGACGCTCCACTTCTGGCTGAAGAATTGGATTTTGCTTTTCG
CGTATGGCAACAATTCCCCGAACGTATTGTTGGGTATCCAGCTAGAACTCACTTTTGGGA
CGAATCAAAGGGGTCATGGGGTTACAGCAGTCGGTGGGGCAGCCTGTACTCCATGGTGCT
GCCGGGTGCGGCACTAGTGCACCGCGCCACGCTGGCGTTGTACGCGGCGAGCGGGCCGGC
GCTGCGGCAGGCCGTGCGGCGCGCGCACAACTGTGAGGACATCCTGCTCAACTGTCTTGT
GGCGCACACCACGCGCCGCCCGCCGCTCAAACTGGCTCAGCGCCGCCGCTACAAGCCGCC
CCTCCATCACAAGTCGCTGTGGAGTGATCCTGAACATTTTGTTCAACGACAATCATGCTT
GAACACATTTGCTACAACTTGGGGTTATATGCCACTGCTTCGATCGGTACTACGTCTCGA
CCCCATACTTTTCAAAGATCCCGTGTCTACCCTCAGGAAGAAATATCGAAAAATGGAATT
AGTTTCATCTTAGAATATTTTGTTCTGTATGTTTATTAGAATACCAATGCGTCGATACGT
AAGCTCGATTTATTATAATAAGAAATAACTTATTTATAATTAATGAATACCTACGTAAAT
AAATAAATATCTTTAATTCTGAAA
(3204 bp)

- SilkBase 1999-2023 -