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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25757_c0_seq5
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_copper-transporting_ATPase_2_isoform_X3_[Bombyx_mori]
Ontology
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0004008 F P-type divalent copper transporter activity
GO:0005375 F copper ion transmembrane transporter activity
GO:0005507 F copper ion binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005770 C late endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005923 C bicellular tight junction
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006825 P copper ion transport
GO:0006878 P cellular copper ion homeostasis
GO:0006882 P cellular zinc ion homeostasis
GO:0007595 P lactation
GO:0007623 P circadian rhythm
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0010043 P response to zinc ion
GO:0015677 P copper ion import
GO:0015680 P protein maturation by copper ion transfer
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0016323 C basolateral plasma membrane
GO:0016787 F hydrolase activity
GO:0019829 F ATPase-coupled cation transmembrane transporter activity
GO:0030001 P metal ion transport
GO:0032588 C trans-Golgi network membrane
GO:0034220 P ion transmembrane transport
GO:0035434 P copper ion transmembrane transport
GO:0043682 F P-type divalent copper transporter activity
GO:0046688 P response to copper ion
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051208 P sequestering of calcium ion
GO:0051591 P response to cAMP
GO:0060003 P copper ion export
Transcript
Level		FPKM:2.53 TPM:2.34
ORF Entry
Sequence
(Nucleotide)
CCTTTCAAGCGTCGATATGTATATTTATAAATTCGTTAATTAAACTAAAAATATTATTCG
TTCATTGCTTCTAGCATAACTTTAGTCACTTAAATTTAGAATTGTTAAATAAAAATATAT
AATATTATATAATACTATTTTTTGTTTGTTTTAAAAAACCCAACTTGTGACGTCATTTGT
GTGTAATCTTTGTCTTTCAATGTACACCCGTAAAGTGAGTCCGTGGTCATCACCCGCCGG
CTGCCCCACGCGTCGAATAGAAACGAATCATTGCTTAGAGGCAGAAATACGCAGTAGGTC
CTAGTAAAGTTTACTAAAACACTGATTTGGCCCCAAATGACGTCATATTTTGGGCGCGAC
TTCTTGAAAACTTTAACATTGAATGTGTTGCCCGCTTCAAACATGTCCACGGTCACATGC
GATGTATTGATGATTGGAAGCCTCATAATGTATTCGATTTTGTCTGGTTTGCGGAATGCA
CCTACGCTATCAGTCTTATCAGGCGTTCAGGCTAGGGCTGTCGCGCGAAAGCTGTTTCGG
TATGAAGGAGACGGCGGCCAGCTCGTCGTCGTCCTGCAGGAGGCAACCCTCGTCGGCTTT
GGCTCTATTGAAAAATCATTTTACTAAACCTTTATCAACGAGGAACGCCAGCTTTCCGTT
TGCTTGTTGGATAGAGCGGTGACACTTCGGTCGCTGGGGTCCACTCTCTCGTCGAGTCCC
CGGTGCACGGACACGCTGTCCAGATCCTCGAGCCGGATCGACTGGAGGTACTCCGGCGTC
CTCAACTCTTCGATCGTTGGCTTCCTGAAAGTTTTGAGCAGCAAGCTAGAGCAGACCACG
GACACTGAGCTCATCGCCATCGCAGCTGACGCCATCCAGGGCTGCAGCTGCATTCCGTAC
AAAGCGAAGGCTCCACTCGCCAGCGGTATCCCTAGCAGATTGTAGACGGAAGCGAAAAGG
AAGTTCAGCCTGACCCTCCTCACGGTGGTCCTGGACAGGTTCAAGCAGGCCACCACGTCT
AGTAGATCGTTCCTCATGAGCACCAGGTCTGCGGCCTCCACGGCCACGTCGGTGCCGCTG
GCGATGGCGATGCCCACGTCGGCCTGCGCCAGGGCTGGAGAATCGTTGACGCCATCACCG
ACCATGGCCACCCTCTGCCCCTCCTCCTGCAGCTTCTGTATTTTGGCGACCTTGTGCGAG
GGCAGCACCTCCGCGTACACCTTCCTGATGCCGACCTGTCTGGCGATGGCGACGGCTGTC
TTTCTGTTGTCTCCCGTCAGCAGGCACACTTCGAGGCCCATCTTCTTCAGCCAGTAGACG
GCCAGGTGGGCTTCGGGCTTCACCTCGTCTGCGACGCCGATGGTGCAGACCAGCTGATCA
TCGATGGCGGCCAGCACGGCCGTGTAGCCGAGCTCCTCGTGTTGGGACAGCGCCTTCTGG
ACCGGCCGCGGCACGTTGACTCCGTTGCGACTCATCCACTCGCGGTTCCCGATCAGGACT
ATATGCTCCGCCGACTCATCTCCGTCCTCGGTCCTGATCAATCGATGCAGTCTCGCGGCT
GCCTGGGCCGAGCTGAGGGCGGCATCGTCACTGCCCGCCACCACCTCGACGGGGACGCCG
TGAAGGTCGAACGTGCACCCCGGCTTGGCCTGGTTGACGATGTTGGCCAGCTCCGGCACG
TGTATGGCGGAGCTGTTCGTTGCTTTTAGCTTCGCCCTGAGGCCGCATCCAGGGGCGGCC
ACGAAGCCGGTACACTGCAGGGGGTTCGCGCCCTTCAGCACCGCACTGCACCACTGGACT
ATAGCTGAAGCTACAGGGTGTTCGGAGTTGAGTTCGGCGGCGAGGAGGCAGGCGACGAGG
TCCGGCAGGGCGGCCGGCTCCCCCGTGAAGAGACACAGCCTGGCGACGGTGGTGCAGCCC
CGCGTTATGGTGCCGGTCTTGTCGAATATCACAGTTTTCACCTTGTGCGCGTTCTCGAGC
GGCTCCGCGCCCTTGATGAGCAGCCCCAGGTTGGCGCCCACGCCCGTGGCCACCATGACG
GCGGTGGGCGTGGCCAGCCCCAGCGCGCACGGGCACGCGATGGCGAGCACCGACAGCGCG
AAGTGGAACGCCGACTGCACGATCAGCTCCCAGTCCGAGTAGCCAGCGTTCAGGTACACC
TCAGGAGTGATGGCCTTTATTCTGTTTATGTCCAGAGCCCCGCTTATGATCCAGCAGACC
AGCGTCAGGACGGACAGGAATACCACCAACGGAACGAAATACCCCGCCATGGTGTCGGCG
AGTCGCTGCACGGGCGCCTTACTGCTCTGCGCGCTCTCCACCAGCCGCACGATCTGAGCC
AGGGTCGAACTTTCCCCGGTGTGGGTCGCCAGCATCAGCACGGCGCCGTTGGAGTTCATG
CTGCCCCCGATCACCAGGGAGTCTTTCGTCTTCGGCACCGGCATAGATTCCCCGGTTATC
AGGGACTCGTCGCACGTCGTTTGACCGGATATGACTTTGCCGTCGACCGGTATCTTGGCG
CCGGGTACTACCTTCAGAATGTCTCCGCGTTCCACCAGGTCAACTGGTATGCACTTCTCA
TTTACAATGTTACCGCTGTTGTCCAGGGTCACCAGCACGGCTTCCGTTGCCTTCAGCGAC
AACAACTTCGACAGGGCTTCCGATGTTTTACCCTTGGCTATGTGCTCCAGCCACCTGCCC
AGAGACACGAAGACCAGCAGCATGGGTGGCGTGTCGAAGAACGTGACCGGACTGGCCTCT
TGGAGGGTCGCCATGGAAGCTACAACCACACCTAGAGAATATACGTAGCTAATGGTGGTT
GTCATTGCTATCAGCACGTCCATGTTCGTCGTGCCGTGCTTTAGAGCTTTATAAGCTTGC
TTGTAGAAATGCCAGCCGCCTATAAACTGCACCGGCGTCGCCAGCAGGAACATGACCAGG
TTCTCCAGGCTGAGTCCGGGAAGCACGCAGCACATATCCTTGGCGCTGTGGCCGTGTGAC
ATCATGGACATGAAGTACGCCATGGCCGCCATGCACGGAGCCCCGAAGACCAGCGAGACC
AGAAACGCGTTCCGCCACTTCCTTATCTCCTCTCTGTGCTCCAAATAGCTGGTCTCCCCC
CGGTTGTGGGGGCTGGCGACCGTCGCCTCGAACCCGAGCCCGGCGACCGCGTCGCATATC
GTGCGGGGCCCGATCTGTTCTGCGTTGTATTTGACGCGGCCCTTGCATGTCGTCAGGGCC
ACGGAGCAGGATTCGACTCCGGTCAGCTTAAGTACCGTCTTCTCTATTTTATTGACACAT
GAAGCGCACGTCATTCCCTTTATCAGCAAATGTATTTCCTTTAAGCCGCTGCCGTCGTTC
TCGCTGATGACCTCCGACGGAAAGCCCAGCTCCGTTATGGAATTGGCCACGTCTAAGGCC
GAGATCTTACGGGGCTCGTAGCAGACCTCGGCCTTCGCAGCCAACAGAGCGATCAGCACT
GAACGCACCCCATATAATTTCGTGCAATGTTTTTCTATCGCGGAGACACAACTGGCGCAA
GTCATCCCGCGCACTTCCAGCGTACATCGGGACAGTTCCGCCTCGGCGACCGGCGGACCT
GCACCATTCGTTTGAAGTTTGTTCTTGAACGGAGACAATTGCTTAGCGCAATCACCAGAT
CCCTCTGTGTTGTTACATATTTGAGACTTATTTTCCGTATAAACCTGTCCGTCGACGGAT
ATGATGTTGACGTCGAAGCCCAGTTCATATATCAGATCCGCTATCTCCCTGGGCGTGACG
GTGCTGGGCAGGAAGGCGACGCGGGCCGTTCCATCGGCGAGCGACACGTGTCCCTTTGTG
ACTCCCGACTTTGCTTTCAAAGCTCCTTCTATGGTGTTGACGCAGGATTGGCAGGTCATG
CCGATCACTGAGAGGAAGACTTCGCTGACGGGCGGCGTCTGGCTGCCTGTCATGTCGATC
ATAATAGCGGTCGGCACATCCTTCGGCAGGAGATTTCTGCTTTCGTCGTCATTATCGACA
GGGACCTCAAACCCCATGTCTTCTATGTGAGACCTGATCGCTTCCAGCGAACACAGTCGG
GGGTCATATCTGATGTAGCCGGCGTTCTCTGATAACTCCACCTTAACGCGTTCCACACCT
GGTACGTCTCTGACCGATCCTTCGATGCTCCTGACGCACGACTGGCATGTCATACCGTTG
ATCGGCACCCTGACCGCCACCAGGTCCTGATCATTGTCGCCGATCTCTTCAACGTCGTCG
AGACGCTGATATTTAATACTGCGCGACATCATGTTGTCACTTTCGCGCACAACACAAGAT
CAATAGCTTTGTCTCATTCTAAGGTCGATCACATTCACACAGTAACAAAGTTAGTGGCTG
GCACAAATAAAAAAAAACAACACTGATTGTTTACAAAACAAAAATTCAAAACACAAACTC
GTTGAACTTCGAACCGAATTAGAACAATTTCGAATTTGGAAAGTTCTTATTATATTCGTG
TGTTTACGTCTCGGTGGGCGGCTTTCGTTCGAAACGCGTCCACTCCGCGTGGCGTAA
(4557 bp)

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