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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25747_c6_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_kinase_C_and_casein_kinase_substrate_in_neurons_protein_1_isoform_X2_[Amyelois_transitella]
Ontology
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005901 C caveola
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0006897 P endocytosis
GO:0007165 P signal transduction
GO:0008092 F cytoskeletal protein binding
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0030036 P actin cytoskeleton organization
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032587 C ruffle membrane
GO:0036010 P protein localization to endosome
GO:0042802 F identical protein binding
GO:0042995 C cell projection
GO:0043231 C intracellular membrane-bounded organelle
GO:0045806 P negative regulation of endocytosis
GO:0048858 P cell projection morphogenesis
GO:0055038 C recycling endosome membrane
GO:0070062 C extracellular exosome
GO:0070300 F phosphatidic acid binding
GO:0070836 P caveola assembly
GO:0072584 P caveolin-mediated endocytosis
GO:0097320 P plasma membrane tubulation
Transcript
Level		FPKM:29.25 TPM:27.08
ORF Entry
Sequence
(Nucleotide)
TTTTTTCACATATGTAACAATTTAATTACCAATATTATTAATATATTAACATAAGTGGTC
CAGAACCACCTCTCTGATAATAATAATATAATACAAATAATTTTCACAAAAGGTTGCTGA
ACCTATAACAATGTTATTTAATATAAACAAGTCGCTACTAACGCGATACAAGTAGTCTAG
GAGGTGTTCGGATTCAGCCTCGTGACTATGTATGACTCCCCGTCATAATCACATTACAAC
AATATAACGAGGTACAAAAGGAAAAAGAAAAATAAAGGTAAACATCTTCGTAATATATTA
ATGATATTTTTTAAAACTAATGACGAGAGGGCGCTTGCGTCGTGCAAAACTTCTTTTCGT
AAATGCTCTATTTGGCAATTTCATATTTGCGTCAAATGTAGCGTAAAATGCGGTAGTGGC
ATATTTAGTTGGGATACAGTGCACATGTCTGCGCTGGTGCGGGAGACGTGGGAGTAGCAC
CTTAGAATGAGAACCGGCAGCCAAAATGGAAGCTTAAATCGAGCCGTCAAAAACCACTAG
GCCAATAATCAGTCATTAATGTTTTATGCGCCCTATCGTAATATTAATACTAGAGTTGAT
TTATATCGATAGCTATCGAGCCACGAATAAAAATTGCTTTAAAACATTTTCCTTTGTTAA
AACAACGCATCCTTATAACGTTGCGTCCATAAAAAGCTTTAACTAAAAAAAAAAAAAAAC
TACAATATATTCCAATCAACACTATCGATATTAACCAAATTTAAATTCTCACATAAATTA
CACATTATATACAATGGGAAATAAATACTCTATACATTCACGACAAGTATTACATCATTA
AAAGCGTGTATGTACACAACCACACCTACAGACAACGACACCCACCGACAGGAGCTTATA
TCACAAAATATATATATGTCCCATTGCCATCTAAACGTTTGGTTTGCCTATTACGATATA
TTTATATATTGGCCTACAATTTTTGGCTTAGCTAAATTGAATGCGCCCGATAAAGGCAGT
GGTGTCCAACTAGTTATTCTCAAGCTTTGTTCGACGATGTTATTCAGTTAACAAAGTTCA
TAGAAACAATAATACGATGTCACTAACACAAATAAACATTTTTTTGGTTTACGTGCAAAT
TGTAGCTAACAATTTTTATCCAAAAATATACGTTCTAAGTCAATTAATTATTCATAAATC
GAAAACGAAGCCAATTAAACCGCTTCGCTATCTTAAAAAATTATTTCACATATTTCATTT
TATACGCATCATCGATTTGAATCTACTCAAACCACATCGATATAACACACTACAAGAATA
CGGCACGTCACTAAAAATTATTGAAAATTGTATAAATATCCTACAATAGCGAGGAATATC
GTGTATAGAAACATTTTTGTTTTTTTTTATCGATCGGTAAATTTTATAGAAATATTTCGC
TGCACATTTACATTTAAAATATATCACAAATGGATGATATATGATTCGACGAAGCGAAGC
GTAGAGTCGCTCGTACTAGACTGCTCATACAAATGTCCTCCTGTACTCTAATGACTAATT
CGCGACTCGCTAATAAATTAATTATGTACTCGTGTATGTATGTATTCGTGAATCCAAATG
TTGCTATGAATAATAATAGACAATACGACGCGCTGTTCTCGATAAATATAAATAAAATTT
AATGTAAACGATTCCAATTGAAGATTTTCTCTTAAAAAAAATCTACAAGTAATTCAGTTT
ACGACGTTGATGAAAGTTCTGATATATTTATAATATTTAGATAATATATTCAGTCGTGCT
GGGACTCTCGTGTGGGCGGCGGCGCTAGTGGCCCACGGGCTCCACGTAGTTGGCCGGGTA
GAGCCCCACGCGCCCGTCCTTGCGTCCCTTGCACCAGCCCTGCTCGTCTTCATCCTCCAA
CTTCTCAAACAGGTCTCCCTGCCGGAAGGAGAGCTCGTCGCTCTCTGCGCCGGTGTAGTC
GTAGAGCGCGCGCACGGGCAGGCCGGGCTCGCCGGAGTCCGTGAGCGCGCCCCCCTCCCC
GTCCCCGTCCCACTCCTCCTCCTCGAACGGGTTGTCGGCGCCCTCCCGCGCGGGCGACGA
CTTGTTCGACTTCGGGCCGCCCGCCGTGCCGTTAGTGACGGCGATGGGAGCGCTGATGGT
CTTCTTGTCTATGGTGTTGTTGGCGGTGGTGTTGTTGGAGAGGGGCGGGGCGGCGGGCGC
GGGCGCGGGGGGCTCCGAGTGGTTGTTACTTTTGTTCGTCTTGTTATTCGTTATTGGCGG
TAACTCATCCTCGCTGACTGGCCGCTGATTGAGCAACGTGATCGGTCCGGTGGGCAGGCT
CTCCTTGGACTTGCCCTTGGCGATGTCCCGGAACTCCTCGGTGTACTCCTCGAATTGAGG
CCAGGCCATCGCCATATTGACCCCGTGGTTGTTGGCCCACCACTTGAGGTCCTTCTGGCT
GTCTGCGTTGTTGATCGTGTGGTGAAACTCTTCGTAGATTTGCGGTAAGCTCGGTTCTTG
ACTTATGTTGAGGCATTTGTGGAAGCTAAACAGCACATCTTTGAAGAATTTCAATCGCTG
CGCTTCCATCTGTTGGCACCTATCGAATACTGAAGTCATGTCCTCTATGTATCGAGGGTT
GTACGCCGTGATCTCGGCTAGAGCTGTCTGGTATTTTTCTCGGTTCTTTGACACTTCGTC
GCGACATTTCGATACACGATCTGCCATTTTCTTGACCTGATCTGGACTAAAAGAGCTGTC
TCCGCTGGCGTTTCTTTCCTGGTTCTGTGCTGTCCTTTCTTGTTTGCAAGCCGTGTGGTA
TTCTAGCCTGGCGCGTTCCACCTTCTGAAGTAATTTCGACCATGGTTTCTGGGCCTTCTT
GAATGCTTCATCCATTTCCTTGCGTTCTTTTAGTTGAATCATTGACTTATGATAAGTTTC
CTTCTGCCAGTTCTTTATCTGTGCCATAACGTCGTTCACCAGCCTATCCCTGACGCTGAG
GTGTAGGTCTGAAAGTCGTTCCGCTTCCACCATGCTGCCCTTCCAAGCAGCTTCCATTGT
GCCGTATTCTGGTCCCTTTTCGATCAAATCATTCCATTTCTTAGCCCATCCTCTGAGGCT
TTTCGCGTACGCCTTCTCGATATCGGCACGCTCTTGGACCAGGGTTTGAAGTTCGCTGCA
CAGTCGATGTCCGTCGTCTACTCTCTTGGTGGTCCTCTTGTAGTTACCAGGCTCCCAGAA
CGAGTCGGAAGTGGTTGTGAGCAACGCATGCTCGTCGCTGTGGTGCGACATGGCGGTGCG
ACACTCACACACCGCCCCTAACTAAGCGAACCGAACAGTGTGGCGATGCCCTTACTCGTT
CGAGAATCAACGTCTCATTGACGCACTTTCCAGTTTCTCACGATCGATAATTCACAACGA
TCAATTAAACCCTGATCAGTAATCCAATATTTTATTTTACACCGATCCTATTACAGCGAC
ACAACAAACATTCTACATCGAACAACACTTACAATTTAGTCACCAATAAATTCACAAATT
TGAATATAATGTTTCAATGACAATTATTCAACACTTCAAAGGTAACGAATTTAACTAAAT
TTGTGAATTAACACAAATTTGGCAAAGTTTTATTCACTCCGCACAACTTGAAACATCGGC
CATCACTGAATAAAATGTTGCCAGATTGCTATAGTCGGAAA
(3701 bp)

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