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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25723_c0_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_Niemann-Pick_C1_protein_[Bombyx_mori]
Ontology
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0005635 C nuclear envelope
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005887 C integral component of plasma membrane
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0007041 P lysosomal transport
GO:0007165 P signal transduction
GO:0008158 F hedgehog receptor activity
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008206 P bile acid metabolic process
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030301 P cholesterol transport
GO:0031902 C late endosome membrane
GO:0042632 P cholesterol homeostasis
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:10.38 TPM:9.61
ORF Entry
Sequence
(Nucleotide)
CTGCCCGGCGTGGCGCTGGGCGGCTTCCTGCCGCGCGGCGACCAGCTCTCTGCCCACGCG
CCCTACCACCGCGCGCAGGCACTCATCCTCACCTTCCTCGTCAACAACAAGCAGGACAAG
TCTCAGCTGAAACAAGCACTCGAGTGGGAGAAGACGTTCATTGCGTTCATGAAGAACTAC
ACGGAGAAGGCGATGCCGGGCTACATGGACATCGCGTACACGTCGGAGCGCTCCATCGAG
GACGAGCTGGACCGCGAGTCCAAGTCGGACGTGTACACCATCCTCGTGTCCTACTTCATC
ATGTTCGCGTACATCGCCATCGCGCTCGGCCGCTTCACCACCTTCTCGCGGCTGCTCATC
GACAGCAAGATCACGCTCGGGCTCGGCGGTGTGGTTATCGTGTTGGCGTCTGTGGTGTGC
TCTATGGGCATCTTTGGGTTCTATGGAGTGGCGGCCACGCTCATCATCGTGGAGGTCATC
CCGTTCCTGGTGCTGGCCGTCGGCGTCGACAACATCTTCATCCTGGTGCAGACCCACCAG
CGCGAGCCGCGCCGCCCCGACGAGACCGTCGAGCAACACATCGGTAGAATGCTCGGCAAG
GTGGGCCCGTCGATGTTCGTGACGTCGGTGTCGGAGTCGGTGTGCTTCTTCCTGGGGGCG
CTGAGCGACATGCCGGCCGTGCGCGCCTTCGCGCTGTACGCCGCCGTGGCGCTGCTCGTG
GACTTCCTGCTGCAGGTCACCTGCTTCGTGGCGCTGCTGGCGCTCGACACGCGCCGACAG
CTCGACAACAGGTTCGATATATTCTGCTGTCTGCGGGGCACCAAAACAGACCTGGCAGAA
CAAGGTGAAGGAGCATTGTACAACCTGTTTCAACATTTCTATGTACCTTTCCTGATGAAG
AGGGAAGTCAGAGCCTCAGTCATGATCATATTCTTCGCTTGGCTCTGCTCGTCTGTTGCT
GTAGCGCCTCACATCGACATCGGACTAGACCAAGAGCTGTCTATGCCCCACGACAGTTTC
CAGTTGAAGTACTTCCAGCATCTGAACCGCTATCTGAACATCGGTCCGCCGGTCTACTTT
GTGCTCACGGACGCCGAGACGGACGCCAAGCTGAACTACTCCACCCCCGACGTGCAGAAC
CTGCTGTGCGGCTCCAGGTTCTGTAGACCCGACAGTCTCGCCATGCAGATATACGCTGCG
TCCCGCAGCCCGGCCGACACGTACATCGCGGCTCCAGCCAACTCCTGGCTCGACGACTTC
TTCGACTGGTCTGTCTCACCGGAGTGCTGCTTCTACTTCCAGTCCAACAACAGCTTCTGT
CCCAGCGACACTCAACCCGAGGATTGTGCCGCTTGCAACATAAAGTTGGTGCAGCCGGAA
GAGCGTCCCAGCCCGCAGGACTTCAGCACGTACCTGCCGTACTTCCTGCAGGACAACCCG
TCGAGCCGCTGCGTCAAGGGAGGCCACGCGGCCTACTCGCACGCCGTCAACCTGCGCTCG
CACAGCCAGAACACCACCGGCATCGGCGCCACCTACTACCAGAGCTACCACACGGTCCTG
CGCAGCAGCTCGGACTACTACGGCAGCCTGCGGGCGGCGCGCGCGCTGGCGGGCTCGCTC
ACGGAGACGCTCAACGCGCACCTCCGCGAACTGGGACACTCCGCCACCGTCAACGTCTTC
CCCTACTCCGTCTTCTACGTCTTCTACGAGCAGTACCTCACCATGTGGTCCGACACCCTC
AAGAGCATGGGCATCTCCGTGCTCTCCATATTCTTCGTCACCTTCGTGCTCATGGGCTTC
GATCTCTTCTCGGCTCTTGTAGTCGTGGTGACCATCACTATGATTGTTGTTAATCTCGGC
GGCCTCATGTACTGGTGGGGCATCAGTTTGAATGCAGTCTCGCTTGTAAATTTGGTGATG
GCGGTGGGCATATCGGTGGAGTTCTGCTCGCACCTGGTGCACTCGTTCAGCGTGTCGGCG
GGGCGCGGGCGCGGGGAGCGCGCGGCGGACGCGCTGCTGCGCATGGGCTCGTCCGTGCTG
TCCGGCATCACGCTCACCAAGTTCGGCGGCATCATCGTGCTCGCCACGGCCAAGAGCCAG
ATCTTCCAGGTGTTCTACTTCCGGATGTACCTCGGGATTGTGCTGTTCGGTGCGGCCCAC
GGACTCGTGTTCCTGCCGGTTATGCTCAGCTATATCGGTTCGCCGGTTAACAAACAGAAG
CTGGCCAACCAGAGGCGGCGCGGCAACGAGACGACGGTCGCCGAAAGTTCGCTCACACGA
GTAAGACACGGCCACCCCACATATTACAGAGAGTACACGTTCGACTCGATACCCTCGTGA
GCTTGCACGGACGATGTTTAGCTGAGATGCGCGGAGGCTGCGTAAACGTGAGCTAGGAAA
CTGTTTGTCTACTCTAAGTACTGTTGTTAGACATTATAATGGCAGAAAAAAATCTAGTTC
ACTCAGTCTGCCTATATAAGACGATAAGTAAATACATAAAATGTTTTATATACATTTTTA
GAAGAGCAAAAAAACTTTAAGAACTTTAAGTATTAACAAATGAACATATTTACAGTAATA
GTTAATTCCCATTAGTTTCGTCACATTTAAGATCTAAGAACCTTAAAAATGTGTCTGCCC
GTACGACCGATATAACAGATTTTGGATTCAATAGATGTTTGACGCGCGGAAAGTATTTAG
TGTCACTTGCAAGCCGCCCCCGTCTCGTTTGAGTTCGTTTACCCGGCACGACAGCTTTGT
GTTACATTGCGCACTATCCATGAATACATAAAAAAACGAATGTCGAATGTTTTTAGTGCT
AGCTAACGTTTACACGGAAGTATTTGATTGTACCCTAACAACCTAGGGAATTATATTTGC
AAATAAAAATGCTCAGCTAAACATTGTATAATACAATTTCGTCACGCAAACAACGCGTCC
ATGTATGCTGTACAATATTAAAACAAGTCACATATTAAATGTTTCAATTAGTATTTTTCT
ATCCGTACACACGTGCGCAGTATTATTTTATTCCTGAGTGTTTTTATTTTTAGAGAAATG
CTACTTGAAATGCTACTTACTGTTACGGCCTTGTTTTCGTATTTTGTTTTTTAATTTATA
TTTCGTTAAATATTTTTGTGACTTTGAGAGCAACGTTCAGGTCAGGATATATTTTCTTTG
ATTTAGTTGTTATTAAATGTATAATGCTTCAATATTCATTTTGTAGAAATAAACGATGGA
TCCGTTTTATGTACAGCTATGCACTGTAATGTTAAAATAATATTATATGTAAAATTAAAC
CATTTGAGTCTTTCTTTTTGTTTTGCTTGTAGTAAATAATATATAATAATTTTAATATTA
TATTAACACAGTTTTACCTAACGAAGGTCACAAAAATATTTATCAGGGAGAGCGGTTTTA
TTTTATTTTTTTACCTTTTTCTTTGTATTAAGTTAACAACACAATATGTTATTTTATAAT
ACACTTCCAACAAACTGGTTTCTAAACTGTTTTATGGTACATGGTATAAAACTGCGTATT
TACATTAAAGTAATAAATGTTTTTTTTTTCTATAATTAATATGCATGCCGTTTATTTTTT
TTAATGAAGAAATTTTACTATTTATTTTCTTTTTTTTTTTTTTTCTTCTCTCTCCATTTT
TTTTTTATTTTTTTTATTTTTTTTTTTTTTTATTTTTTTTAATAAT
(3706 bp)

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