| Name | A_BomaMG_comp25718_c0_seq1 |
| Scaffold_id | |
NCBI non-redundant
(nr) | hypothetical_protein_KGM_01725_[Danaus_plexippus] |
| Ontology |
| GO:0000245 |
P |
spliceosomal complex assembly |
| GO:0000375 |
P |
RNA splicing, via transesterification reactions |
| GO:0000398 |
P |
mRNA splicing, via spliceosome |
| GO:0003729 |
F |
mRNA binding |
| GO:0005515 |
F |
protein binding |
| GO:0005634 |
C |
nucleus |
| GO:0005654 |
C |
nucleoplasm |
| GO:0005681 |
C |
spliceosomal complex |
| GO:0005686 |
C |
U2 snRNP |
| GO:0005689 |
C |
U12-type spliceosomal complex |
| GO:0006397 |
P |
mRNA processing |
| GO:0008380 |
P |
RNA splicing |
| GO:0016607 |
C |
nuclear speck |
| GO:0034693 |
C |
U11/U12 snRNP |
| GO:0044822 |
F |
RNA binding |
| GO:0045815 |
P |
epigenetic maintenance of chromatin in transcription-competent conformation |
| GO:0071004 |
C |
U2-type prespliceosome |
| GO:0071013 |
C |
catalytic step 2 spliceosome |
|
Transcript
Level | FPKM:0.55 TPM:0.51 |
| ORF Entry | |
Sequence
(Nucleotide) | AAATAATGTACTTGCTAAATATGTTTTATTATTTATTTTTAACACTTAAACTTTGTTTTT
ACAGTTTCAAATGCAGGATGGTTCAATTACACATGAACCTACGATAAAAACATTAAATAA
GAACAATATCTTTGCATTATCATTTATTTTTCAGTAAACCCAGAAGTGTTTCTTAATTAT
AACTATCTTAATATATTGTTTTAAAGCAGATAATCTAATTCGTATCTAATGAAGTGATTA
TTTGGGTCATTTTGTATTCTGGGATATCCTGCAACAAGTGCGTCCTGTCCTCCGATGTAA
AGCGTATTGTAAATTTTCCAATAAACGTCGCGTACTTTCCTCGCTGGATGGAACAAGCCC
TGTAATGCATATTGAAGTATTTTAATGGGACCTAGGGCAACTCGCATGCCCTCAACAGCG
TCCATGAAGGCTTGCACCAGATGCGGCGATGTCTCAAAAATATTTGGCCAAACATGATTT
AATAGATGTACTAAAGCATCTTCACAGCCGAAACCATACACGCCGAGCGACATGTGTTTT
ATGGCAGCGCAAGCCGTTTGTCTGTGTACTAAATCTCGATCCATAAGCGCGTCTTCCAAT
AATGGGCAAACTGCATAAATGTAATCCTTGCCCATTTCTCCAATGTACTCGAAAAGGAAA
GATAGTGATTTGAGCACACCATTTTGAACATTTAATTCCGGTACTCTGTATTCATTCATT
AAAGCAGGTAGCACTGTGAAAGGTGAACAGGTCTCTGCAACTATAGCAATAGCGACCGTT
GTGCACACTCTGTTCTGTCTCTCTTGCACTTTCAGATTGTTAAGTAAGGTTGCGAGTACG
TCATGAGGACCGATGGCTTTAGCAATATAACCAAAGGTATTTACAGTCGCTCGTCTAATT
GCCTTCTTATGAGCCTTTAATAGTTCAAGCAATTCAAAACATATTCTCATCCATTCTCTG
GCCGAAACAAATTCCGGTCCTCTGTCTGCAATACGACCCACTAAATCAATACAATTTTCT
TGTACTTTTTCATGCCTGTTTTTCAAAATGGGTGTAAGTCTAGGCAGGAGATCCTTTATT
GGTGGAGTCATCTTTGTCATTCCAATAACATTGACAATTGCTTTTAATGCACCAAGTATA
GAGCCTAGCACTTCAGGATATTCCTCTCCCAAGTACTCATACAGTACAACACCAAGATGC
CCCATTAACTTTTCCTCCTGACAAGTTTTCATCACGACGGCGATCCGAGAAATGAGATCG
GCAGCTTGTTGCCGAACTTTAGCAGACTTGTTGTTCATACGCCAAAGAATAATACCACAT
ATCTGTGGTAAATAGGGCTTTACGCGTTTTCCCAATTGATTCACGATTGTTCCAAAACCG
TTCAGCATCACAACATCCTCAGTTGTCTGTTCTTGGAATGCATACAATATTCCATCGATA
AGAGCTTCTTCGAGCTTAGAATCAATGTCTGCTGCTCCTAAATTAGCGAGAATCTTTTCA
ATGGACTCCATCACCATTTTTCTATACTGCTCATTGTCGTCTTTTAGATCATCAACAATT
CTGTTGATAATTTCTGATGCACCAACCTTGTTTGCAATTTCCACTGTGGTGTCGACAAGC
TGGCGATAGTTTCGTCTGTCGAGGGCCATACGATGGTTCCAGAAGTGTTTAAAGAAATGC
GGCAATATTTCATCCATTATGTATTGAGGCTCAACACCGTCGGTACCGCAACATTGTTTT
ACTACTTTTAAGACGATTTTTTTCATTTCTTCATCGGGCGACTGGAACTCACGAATAAGA
ATTAGCATCACTTCTCGTGTGTAGTAATTCGCGTATTCTGCATCCATGAGAGGGATGAGG
TATCCGATGGCTTTCAGGAATGCAGCCAGACCTTTACCACGATGCGTACGAATACCTTTC
CACAGAGGTTTGAGCACGGAATCGAAGGACTCGATACCGTAGGGCGTGGCGGCCTCGGCC
AGAGCCGCGCTCGCCAGCGCCGTGATCGTTCGGACCTTCTGTTGTTCGTCCACCAGACCA
TGTTCAATAATTTCAACAAGAGATTTCAAATGTGGCAGAATAGCACAGCCCATCAGAATA
GCAATTTGTTGCACAATCTTTATTCCTGTGTGACGTGCTTGCCAGGATTTCTTAGATCTG
CACACAGCTTTTAAAAATGGCAATAAAGATGGAATACCCAAGGCCGATGCCACTACTGCA
AATGCTCGAGCAGTTGTGTTTCGTACATACTCATCGATGTTGTCTATATCAGGCCTCATT
GTAGAAATCATAGTAGCCAAGCCGGCCGCTTTAGCTAAATTTGAAATGATCTCGCGACCT
TCGACACGCGCATAATAGTCTTCATCAATAAGCAGAGGTTCAATGACGACAAGAATCTTA
TGTACGTAGGGTCGAACCAAGTCGTCTAATTTATACAAAATCCTGTCTATCACTTTGACC
AGTAGATGTCGCTCTTGATCTTCCAGCGTAGGACTCATCAGTAATGGCAGAATTTGATTG
AAAAGTGGTCCAGCACCGAATTCGCGAGCTTTATCTGTTATTTGTCGTAAGGCAGCTTTG
CACATTGGTGGCGTACCGTTCTTTATTTTCAAAAGAAGCTTCATTATTTTCCGTTCCTTA
AGTTCGTCAGGAGAGAGTGTATCCTCGTCGACGTCGATGAGAAGTTTGTCGAAGTACTGG
GCGTCCTCGGGCTTCATAAAGGGCAGCTGCTGGTTACCCTTGGGCTGAGGGTCGAGCAGA
CGCGCGGCCGCCGCGGCCGAGCCGCCCGGCTCCTCCGTCTGCATGAAAAACCCGATTGGA
GTACCACCCAACGGCGTGGGCGTCGCCGTCAGCTTGCGGGCCGGCGTCCGAATCGGGACG
TACCCGGCAGGCGGTGGTAAAACCTTGTACCCAGGAGGGAACATGGCATCCAGTTCTTCA
TCAGTGTAAGGTCTATTACGCTCGTCTATTTCTTTCTCCCAACGATAAGCTTGTAACTGT
TCTGGAGTCATGGCTGCAACATGACCAGGTGTTGGTGTAGCCAGTGCCATGGCTTTCACT
CCCACAGGTGTAGACAGCGATGGCGTGGCGTGCGATGGTGTGGCGTGGGAAGGCGTGGCG
TGAGAAGGCGTGGGGGTGGCGGGTGCGGGCGTGGCACCGGGGGTTTCGTCCCAACGCGAG
CGCCGCTTTGTGCCAGGGGTGGGGGTCTCCTGTATTGTATCCACGCCTGACCCGCGATCT
GTTCGTGGTGTCTCAGCCCAACCGCTGTTGTGTCCTGGTGTTTCTCTATCTGTTTTTGGT
GTTTCATCCCAGCGATTTCTGCGAGAAGCGTGATGAGCCGGAGTTTCGCGGCCCGGAGTG
GCGTGTCCGGGAGTGATGTGTCCTGGTGTGGCATCCCAAACACGTGCCGATGGCGTGGCA
CCGGGCGTCTCCCCGCCCCGACCTGCTCCCGGAGTTTCTTCCCATGTGCCTCTCTCAGCA
TCCCAAGACGGAGTGGTCTGTGAGCTTGGTGTAGTTGATACTGTTTTCTTAACAACTGGT
GTTTCTTCAGAACTTTGATCCCATCTACCTTTGCGTTTTGCTGCTGGTTTTATGGATTCT
CCATTAGATTGTGGTACTGGTTTGAGAGTTCCTTCCCTAGCTTTCTCTAACAGTTTCTTT
CTGAGTTCTGTTTCTTCAGCAAGAAGATACTGCTCTTTCATTATATCAGTGTATGTCCTC
GATCCGACATCAGGAGTTTTCCCACCTTCTGCAAAAGGATCATTTCTTTCAGGTGATATA
ATCATCCTGCGCCTCTTTTGTCGATATTCATCCTCTCTATCAGCGATAGTTGGTCTTCGT
TTGTCAGCAAAAGGATCAAATTCTTTATCACTTTGTGCAATGTCATTCAACAGTGAAGCA
GGTGCTGTATATCCTGGCCTTTTCTGAGTAATAGGAACATTTTCGAGGTCATCATCTTCT
ACTTCGTCATTAGCAGCAATTGATGTCACATATCCGTCATATCTGGACTTGCCTCCTTGG
CCTGTGCTATCATATATATCGCTGTCATAGTAAGTCTCGCCGAGAGACACGCCTTTGTTG
GAACCATTTTCTGGTGCTTCAGTTTTTTTTGATTGTATTTCTTTTATTTGTGCTTCAATG
GCTTCATGAGTTCTTGGTATTTTATCCATTTTTAGAAGATTGTAGACATTTAAGCAACTT
TACGGACAATGAAATCAAATTATTTTCTCTTCTATCGATGATTTATTAGATAGGTAGCGT
GAGTTTTTTTCGTAAACACAGACTATGCCCGA
(4292 bp) |
