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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25713_c2_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_transcription_initiation_factor_TFIID_subunit_6-like_[Bombyx_mori]
Ontology
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0005634 C nucleus
GO:0005669 C transcription factor TFIID complex
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007221 P positive regulation of transcription of Notch receptor target
GO:0022008 P neurogenesis
GO:0046982 F protein heterodimerization activity
GO:0051090 P regulation of DNA-binding transcription factor activity
GO:0051123 P RNA polymerase II preinitiation complex assembly
Transcript
Level		FPKM:6.99 TPM:6.47
ORF Entry
Sequence
(Nucleotide)
CTTTTATCCAAATAGTAAATAAATTAGGGTATATAGGTACGTACCTACCTACTTATCTAC
ATTAATTAACTTTACCTTATCACAACAGGAAAAAATCAGGAATAAAAAATTAAAGATTAA
CCCAAAGAATACAGTGATACAAGGGGTCTATCGTAATCGTAACCAATTTGGTGATAAATC
ATTGTTTAATGCTGTAGTCAACGTATCTTAAAGATTTAATTTCTATCATGGGCGACTCAG
AATTGGCTTATGGATCTTCGTTAACGTTGGATTCCATGAAAGTGATAGCAGAGAGTGTTG
GTATCGCCACTCTTGGCGATGACGCTGCTAAGGAACTCGCTGATGATGTTACATATCGCT
TGAAAGTGATTGTTCAAGATGCCATGAAGTTCATGCATCACTCAAAGAGACAAAAACTTT
CCATTACAGATATAGATCATGCCCTGAAGATAAAAAACAATGAGTGTCAATATGGATTTA
TTCAGCCTGATTCGCTGCCATTTAGGTTCGCATCTGGAGGAGGTAGAGAACTCCATTTCA
TTGAAGAAAAAGAGATAGATCTCTCGGAGATTCTATCAGCACCACCTCCAAAGGTTCCAT
TGGATGTATCTGTTCGTGCACATTGGCTAAGTGTGGATGGGGTTCAACCAACAGTACCTG
AAAATCCACCACCGCTTTCAAAAGAAGCTCAGAAACTTGAATCTGTTGATCCAATAAGTA
AACTGAGTAAACCAAGCAATAAAGATTCTGCAGGTAAACCTATATGTGGCAAAGCAGCAA
GATTGAAAGCATCAGAATCTGTGCATGTTAAACAGCTTGCTACCCATGAATTGAGTGTTG
AACAGCAGCTCTATTATAAAGAAATCACAGAGGCCTGTGTTGGCAGTGATGAAACGAGAC
GTGCTGAAGCGCTCCAGTCCTTAGCTTGTGACCCAGGACTACACGAGATGTTGCCTAGAA
TGTGTACATTCATATCTGAAGGTGTGAAGGTTAATGTTGTACAAAATAATCTGGCTCTTC
TCATTTACCTGATGCGAATGGTTAAGGCACTACTTGATAACCAGTCACTATATTTGGAAA
AATATTTACACGAGTTGATTCCGTCCGTGTCGACATGCATAGTATCACGACAGCTGTGCC
TTCGTCCCGAGATGGATAACCACTGGGCCCTGCGAGATTTCGCCGCGCGACTCATGGCTC
AGATATGCAAAACATTCAATACTTCAACCAATAATCTACAAACGAGAGTCACCAGGTTGT
TCGCGAAAGCCCTCCAATGCCCTTCACAAACAAACAACGAAACGGGTCCTTCTATGGCGA
GCATGAAGGAATCGGAGAAGACTCCTCTCGCGTCGCTGTATGGAGCCGTGCAAGGATTGG
CAGAGCTGGGCCCCGAAGTCGTTAAAGTGTTCATTCTGCCGCGCGTGCGTTGGTTGGGAG
AGCGCGTGGAGGGCGCGCTGAGCGGTATCGGTGGCGCGGACCGACTGGCGGCCGGCAACC
TCAAGCACCAGCTGCTGAAGGTCCTGGCCCCCGTCGTCCGACAACTGCGGCAACCGCCCG
ACCAACCCGAAGACTACAAGCGCGACTTCGGGTACCTGGGTCCTAGTCTCCAACAAGCCG
TCAGCAAGATACGCTCGTCTCCCTCGTGCAGTACCGCAGGAGGCGCCGTGGCGGTAGTCA
CCTGCACGCCGCCCCTATTGCCTACCGCGCCCTCGCCTTCGCCTTCCAATATATCGCATA
CTACAAAGACTGAAACAGTGACCACTCGTAACCTGGTGATAGCGTCATCGACGCCACAAT
CACCGGCCCCGTCTACTCCGCCGCCACAGAAATTTGTCATTGTCGCGTCTCAGCAAAAAC
CTACCCAGATTCAATCTTCGAGCGGTACGGGGCACATCGTAGTTCACAGCTCGCAGCCAA
CCATAGTGAGGAGTCAAAACGTTCAGTCGGTGGTGGTGACGAGCGGACCGGCGCCGGGCG
GCGCAGCGCAGAAGGTGATGGTCGTCGGAGTGCAGCCGCAGCACAACCAAGGACAGGCAC
CGGTGTCGGTGGTGGCGAAGCCCGTGTTCGCTCGTGGGGGCGGCGGACCACAACCTCCGC
CTGAACTAGACGACCTCTCTCATCTCGCCTGACAGCCACAGAAGCTCAACTTCACCTATA
TCAAACAATCTAAGAAGAATTGATTATAAGAAAATACTATTGCCAATTGTTTGTTAAACA
CTTCTTGGCATTCATTTATTTATTCATAATTGTAAACATGACAATATGTTGTTTATGGTG
GTATGTTAAACTAATAAATTTGATGATTTATATATTTTTTTTAAATATGTACCTAGCTGT
TAAGTTAACAATACATGTTTTAGGCAGGCAGTGGCAAGTTGTAAGCAGCAATTAGTCTAG
CCCAGCGGTCGGGGAACTTTTTAAATTATCACCCCAAAATATTATAGCACCCACGATA
(2458 bp)

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