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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25695_c3_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_Fanconi_anemia_group_M_protein_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000712 P resolution of meiotic recombination intermediates
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0004386 F helicase activity
GO:0004518 F nuclease activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006259 P DNA metabolic process
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016787 F hydrolase activity
GO:0031297 P replication fork processing
GO:0036297 P interstrand cross-link repair
GO:0043240 C Fanconi anaemia nuclear complex
GO:0071821 C FANCM-MHF complex
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:2.71 TPM:2.51
ORF Entry
Sequence
(Nucleotide)
ACGAATGCACCGGACGACTTATCCGTTAGGCCACGACGACTCGGTTAAGGCAACATCGAA
AACTTAAGATTAGAAGAGAATTAAATTGACTTCAAAAATGTTTTATTATCGAAAACATAA
TTTACGATAACGGCTCTATACCATTTTCTAGTCTGTTTGGCGTTTGATTTGTTTTTAACG
TTCATTGCGTGCTATCGAAAAATTACAAAAAAAAAATTGTAAATAGACATGCTTTAACAA
AAACCGACTTCAAATAGTAGAAAAAAAAAGATAATACACTAAAAACAATAATCACCGAAA
TCGGTTGGCGTGATATTGAGTTATTGAGTTATTCATCTATATGTCGCACGTAATTAATGC
AAATTTAAGACTTTATGGTTTTCTCATGGATACCATTATCTGAACTGAACTAAATGGGTC
CACATGGGAAGCGTCAGCTTTCTAATAAAAAAAGAATCATCGAAATCGATTCACCCAGTC
AAAAGTTATGAGGTAACAAACATAAAAAACATACAGTAGAATTGAGAACCTCCTCCTTTT
TTGAAGTCGGTTAAAAAGAAAAATACTCTTAACAAGTTATTTTGTTGGTTCTTTCTCAAA
TTCATATTCTAAAATTCAATATTATAATCTATTATTAACATACGTCAGCTGCTGTCATCC
GAATCGCTTTGTATTGACCTCTTACAATTTTTGTTACTTCGCTTCACAAGAGGACTGTCA
CCAGCTTCTGGAGACTGTGGCTCCTGTATTCTACTTTTTTTCTTCTTTTTTCTCCGTTTT
TCTAAAACCATTTCCGCCACTTCAAGTGCTGAGACTTCATTGACTTGAGTAAGTCCAATA
TGAGAGTCTACACAGAAACTATCCATTTCGTATGAATCTTCTTCAACAAATTGCGATAAA
ATATCTTCCTTCAGTCTTCTAGGTAACTCCGGTATTTTGAAGCCACCTTGTTTTAGGGGA
CTCTTTGTGGTTTTGAGGTAAAGTGCCTGCACATCCTCGTGTTGCGTTACGTTGTCGTCA
CATATGAAGTCGATGATACTACCGACGCTTTCGTCCGACAGTTCATCACCACTGTCGCGA
TCATCTACATCAGACAGTTCCGCTTCCAGATCCAAGTAAGAGTTACATTTCTTTTTTTTT
TTTTTAATTTTGATTGTTTTGAGCGAACTGTTTCGCGCGGGACTGTCGGCAAATTTATTT
TTATCATCTAAGATGAAATCGTCATCGCTATCGTCGAAAGCAATTTTCCGTTTTTGCGGT
GATTGTAATTTCTCAGGGCTTCTATTGTTAAATATTGTATTATATTTATTCATTAAGCTT
TGTTGCAGCTTATTTGGATCGCGTCGATAGTTTTGCAAGAACTCCAAATTTCCTTTGACA
TCTTTCTCGGCAGCGCTTGTAGTTTTCGCGAATTGAGAAGCAAATTGTGGATTTCTATTT
TCCTTTTGCGACAAGACGTTGCTTTGGGAAACGGAGCAATGGAAGTTATCGAACTTCTGT
TTAACCTTGAACGAACTAACGGAAGCCAAAATCTTTTCTTTTAATGTTCTCTGTTTGTCG
GGGCTCTTTGTTAACTTTGGTTTTTTATTAAAATACGGAGAAGCTATCTCGTCATCATCA
ATTTCTAATTTACGTTTAGAGTCAATTTGTACAGATAATTTATCTTGCATTAAACTAGAA
ACTTTGTCGGAATGAGAAATCGAGCCGCCACTTTCACTATTATTTTCACGTTCGCTTTTG
CCAAATACGTCTGCCGCATCATAGATCACTGTGTCCTTGGAATCGCTGTCACTATCTGAA
ATTATTATACTGGACTTTTGTGAAAGATCTCTGGAATAAGAGTTTCTATTAGATTTCGTC
AAATCGGTTAACTTCTTGCGTTCAGTCTGTGATGGTAGAATGGGAGAAACGCATAAATTA
TCCTCATTGTCGTTTATATCAGTTTTTGAATGTGTAGCTACCGATGCAAGAGCTTTCTCG
TCTTTTGTTTTGTTAATTAATTCAAGTACTTGGGTTATTGTAAACATACTATCTTCGGTT
GTGTTTGATGTATTTTTATTTTTAGAACTTGCATTGTTGTCTATTTTATCAAATAATAGA
CTCTTTTTAGCGATCGGTGTAGAGTTCCGATGTATCTCTTTCTTGGTGCTCAGTTCGAAT
TTGCGTTTTTGAGAACAGAGTATAGGCGACGTCACCTGTTCTTTGGCTTTAACTCTTCCA
GATAAAATAGATGGACTTAACGGATTTTCATCTGGCATTGGTTTGTGAGTTTCTGTTGTG
GAACGAACGTTTAGGAATGTCACATCGTCAGTTTTATCTGCCTCGATATCATTCATCTCT
GGTTCGTCGCATTTCTTATCGAAACTATCTTCGTAATCGGCAAATATATCTTCAACGCTG
TCAAGACCAAAGAAACTCAGTACCTTCTTCTCATTTTCTTCGGGTTTATCAGTTTTTTCA
GCTTCAAAATTGTCCAAAGGACTACTGTTGGCAAATATATCATGAAGTTCTCCTATATCA
AAATTGTCCTCTCCATTCACCTCACCTTTTTCAAATTCATTGTCATTCGATTTCTCACTA
AAGATCTGTGAGTCGAATTCCAAGTCTAAATCAAAGTTAGCTGAAACATTTTTTTCAGCT
AAATCTGTTTTGTTGACGTCAGGTGAAGCTCGATCCTCGACAGCCCTATTCCGGTATTCA
CTAATAGACTTCGCAGAAATGTAATCGATTAGATCTACATCAGGTAAATTTATTTCATTC
AAATTTATTAAAAGACCGGAAGTTTGTTTTTTGTCTGACACACCGTTGAAAATTTTACAT
TCGCACAAGTTTTCACAGATATAACATTTGTTCTCAGAGTTCGAGTTATTTAAGTTCAAA
TCAACAAGAAGGTCGACGAAGGCAACGGGTGCTGTGTTATCGTTTTGAAGGCCTAAATCG
TTGATTAATTTCGTGTAGCTTTTGGTCGACTTGGTCGCCGTACTGAACAAGGCCCTGATG
TCTCCGTTCTTTTTCCCGGGCGAGCTCGCCATCTTTTGTCTCTTTCTTGCCTGTTTCGAT
TTAACCGGAGAGGGCTTTTGCAATTTTGTGAAGAATTCTTGTGAAGCGAGACTGTTCTGT
GAATTTTTCAATTCGTTTTTTTTCGTTTTACTGAACTGAAGTAGTTCGGTCAGAAGAACT
GTGTCCTCCGAATGTTCAACGTTCACAGTGTCCTGTAGAGTTCTCTGCAGTTCCAACCAC
TTCGACATATCCAAATTTGTTTCAACATTACTATCATCTTTTAGATATGTTTCTCTGTCC
ATGGACCAGTATTCTTTGTGTTCAGCAAAGTATTTATTCTTAGAGATGGTCTCGGGCGAC
AATTTGCCGTATTGTTCATTTGTTATGAGTTCCGATTTGCCTTTCGATTTTTTCGTTGTA
TTCGAAGGCTCCTTCGATTTGCTTAGCAGCATTGAACGAATGTTCTTCTGACCCTTTTTA
CAATTCTCATTGTTTTGTTTCGTTTCGTTTCTCTTGGCGACCGTGATGTGCAGCATCTGA
CATTTGGGCGTGAAGTCGTGCGGCATCATGCGCGGGTTGCGCTTGTAAAGGCTCTCCTTG
ATTTCGTTTGACTGCAATAGTTTCGCGTTCAGTCCGTCCCTTTGACGCATACAATCCATT
AATGTCTGATGCTCTCTTCCTTCCGTGACTAGAATATACACTTGTCCTCCACGTTCGCGA
CCCGTCCTACCGCACCTTTGCACGAGCCTGACGGGCGACCTCGTGGAGATGTCGAAGCAG
AGGATGAGGTCGACGGAGCCCACGTCCAGTCCCTCTTCGGCGACGCACGTGGCGACGAGC
GTGTTGCACGCGCCCGCGCGGAACGCACGCATCACGCGCAGCTGCTGCGGCTGCGACACC
ACCGTCCTGCCGTCCTTACCTGAAGCTCCTTGTCCGACAAACGTCTGAGGAGTAATGAGA
GGACGACACTGCAGCAGCAGACAGTGCACCAAGTTCACACTCTCGCGATATTCACAGAAC
ACAATGGCCTTAGTGTCCTGTCCATTTTGTTGGGCCTTCGTGAAATGTTCCATCATTATT
TCTTTCAACTTATAGAATTTGGGATGGCCAAAACTTAAATTTTTAGGAATCTATTACTGC
GGTCTTTCGTTTGGAAGTCTTTGTACATTATGACTATTCTCCCTTTTGATAAATTTCCTA
GATTCTGGGGCAGGATGTTCAATTGTTTCAGTCGTCTTGCATAACAGTCTAGAATCTCAA
CATATCTTTGTTTCAGGTGAGTCAGCTCTGTTCCTAAAGGTATAATAACCGTGTTGATTT
TACGAGAATGACTATAACGTGCCACATCTATGCACTCTTCTGATCGCAGTTCTAAATTTG
CTATATGCAAACTTTTCACAACATTGACAACATCATCCACTTTACTACCTGGTGTTGCAG
ATAATGCCAATATCCTATATGTCTTGTGTCCCATATCATCCAAGGCATTAATAATCTGAC
AGTATGCATAATTCTTCCTAGCTCTATGAGCTTCATCTATTACCAAACAACGGATCTTAT
CTCCAAGACATATACCTGATTTTATGTCATTGTATATAACTTGTGGAGTAGCAAAGAATA
CCCTTTTATTTTGCCAGTGTAATTTTCTTGTCGAGGTTTGCATGTGACCTGTCATTTCTA
TAGTATCCCTCGGCGGTATAGCTACAATATTATAACAGGCATCTATTTGTTGAGCCACAA
GTGGTCTGGTAGGTGCTGTAAAAACAATCTTGCCTAGTGGATACCATCTGTAGAAATTGT
ACATAACAACAGCTGCTATGAATGTCTTGCCCAAGCCTGTGGGCAGACTCACCAAAGTGT
TTTTCACTAGTGCAGCATTTATGATATTGAACTGATAATCTCTGACTGGATAGTTTGTTG
GGTAAATCCATGTTTGTCCTAATAGTTTGTCATAGCCATTTAACTCCTCATCACAACATA
ATGCACTTACATTCAAATCATTTTTATTTAATGATCCATTTGAGGTTTTTACGTGAAACT
TAGATTTATCGAAGGAAGTGTTTGCAAAATTCGCCAAAAATGTAGAATCATCAAATACTT
CATCATCTTCGTATTCATCAATAACTTTTTCGTCCCTACAATTTCTTGAATTATTCATAG
CTATTCATGATAGTCAATAATATAGATTATTTATTAATTTAGAATATTTAGATCATAAGG
CTATTTGAAGAAAAATCCGC
(5240 bp)

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