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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25695_c3_seq26
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_Fanconi_anemia_group_M_protein_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000712 P resolution of meiotic recombination intermediates
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0004386 F helicase activity
GO:0004518 F nuclease activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006259 P DNA metabolic process
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016787 F hydrolase activity
GO:0031297 P replication fork processing
GO:0036297 P interstrand cross-link repair
GO:0043240 C Fanconi anaemia nuclear complex
GO:0071821 C FANCM-MHF complex
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:0.42 TPM:0.39
ORF Entry
Sequence
(Nucleotide)
TCTCGATTATAATTGATATTTACAGTTAGATTGATAATTTATATCACAGAACCAAATGTA
TATACGAATCTACGAATACAAAGATCATCAATTAACAAATCAAATTTAAATTTAACATTG
AATGACTGTGTTCTAGTAGGCCATAATATCATTGTTGGCTTGGTTACAAGTGTACGGCAC
TACCCATCAAGATTGGAAACTCTTGAAATGCAAGAAACCATAAATATGTAACACAAAAAA
TTGTTCTAGAGTCCAGAAGAACATTCAGCATGTCTCTTAAATAGTTACAGCAATTCGTTG
TTGCTAAGTTGTTAAAAACTAAAAAAAAAACCATACAGACGAATTGAGAACCTCCTCCTT
TTTTGAAGTCGGTTAAAAAGAAAAATACTCTTAACAAGTTATTTTGTTGGTTCTTTCTCA
AATTCATATTCTAAAATTCAATATTATAATCTATTATTAACATACGTCAGCTGCTGTCAT
CCGAATCGCTTTGTATTGACCTCTTACAATTTTTGTTACTTCGCTTCACAAGAGGACTGT
CACCAGCTTCTGGAGACTGTGGCTCCTGTATTCTACTTTTTTTCTTCTTTTTTCTCCGTT
TTTCTAAAACCATTTCCGCCACTTCAAGTGCTGAGACTTCATTGACTTGAGTAAGTCCAA
TATGAGAGTCTACACAGAAACTATCCATTTCGTATGAATCTTCTTCAACAAATTGCGATA
AAATATCTTCCTTCAGTCTTCTAGGTAACTCCGGTATTTTGAAGCCACCTTGTTTTAGGG
GACTCTTTGTGGTTTTGAGGTAAAGTGCCTGCACATCCTCGTGTTGCGTTACGTTGTCGT
CACATATGAAGTCGATGATACTACCGACGCTTTCGTCCGACAGTTCATCACCACTGTCGC
GATCATCTACATCAGACAGTTCCGCTTCCAGATCCAAGTAAGAGTTACATTTCTTTTTTT
TTTTTTTAATTTTGATTGTTTTGAGCGAACTGTTTCGCGCGGGACTGTCGGCAAATTTAT
TTTTATCATCTAAGATGAAATCGTCATCGCTATCGTCGAAAGCAATTTTCCGTTTTTGCG
GTGATTGTAATTTCTCAGGGCTTCTATTGTTAAATATTGTATTATATTTATTCATTAAGC
TTTGTTGCAGCTTATTTGGATCGCGTCGATAGTTTTGCAAGAACTCCAAATTTCCTTTGA
CATCTTTCTCGGCAGCGCTTGTAGTTTTCGCGAATTGAGAAGCAAATTGTGGATTTCTAT
TTTCCTTTTGCGACAAGACGTTGCTTTGGGAAACGGAGCAATGGAAGTTATCGAACTTCT
GTTTAACCTTGAACGAACTAACGGAAGCCAAAATCTTTTCTTTTAATGTTCTCTGTTTGT
CGGGGCTCTTTGTTAACTTTGGTTTTTTATTAAAATACGGAGAAGCTATCTCGTCATCAT
CAATTTCTAATTTACGTTTAGAGTCAATTTGTACAGATAATTTATCTTGCATTAAACTAG
AAACTTTGTCGGAATGAGAAATCGAGCCGCCACTTTCACTATTATTTTCACGTTCGCTTT
TGCCAAATACGTCTGCCGCATCATAGATCACTGTGTCCTTGGAATCGCTGTCACTATCTG
AAATTATTATACTGGACTTTTGTGAAAGATCTCTGGAATAAGAGTTTCTATTAGATTTCG
TCAAATCGGTTAACTTCTTGCGTTCAGTCTGTGATGGTAGAATGGGAGAAACGCATAAAT
TATCCTCATTGTCGTTTATATCAGTTTTTGAATGTGTAGCTACCGATGCAAGAGCTTTCT
CGTCTTTTGTTTTGTTAATTAATTCAAGTACTTGGGTTATTGTAAACATACTATCTTCGG
TTGTGTTTGATGTATTTTTATTTTTAGAACTTGCATTGTTGTCTATTTTATCAAATAATA
GACTCTTTTTAGCGATCGGTGTAGAGTTCCGATGTATCTCTTTCTTGGTGCTCAGTTCGA
ATTTGCGTTTTTGAGAACAGAGTATAGGCGACGTCACCTGTTCTTTGGCTTTAACTCTTC
CAGATAAAATAGATGGACTTAACGGATTTTCATCTGGCATTGGTTTGTGAGTTTCTGTTG
TGGAACGAACGTTTAGGAATGTCACATCGTCAGTTTTATCTGCCTCGATATCATTCATCT
CTGGTTCGTCGCATTTCTTATCGAAACTATCTTCGTAATCGGCAAATATATCTTCAACGC
TGTCAAGACCAAAGAAACTCAGTACCTTCTTCTCATTTTCTTCGGGTTTATCAGTTTTTT
CAGCTTCAAAATTGTCCAAAGGACTACTGTTGGCAAATATATCATGAAGTTCTCCTATAT
CAAAATTGTCCTCTCCATTCACCTCACCTTTTTCAAATTCATTGTCATTCGATTTCTCAC
TAAAGATCTGTGAGTCGAATTCCAAGTCTAAATCAAAGTTAGCTGAAACATTTTTTTCAG
CTAAATCTGTTTTGTTGACGTCAGGTGAAGCTCGATCCTCGACAGCCCTATTCCGGTATT
CACTAATAGACTTCGCAGAAATGTAATCGATTAGATCTACATCAGGTAAATTTATTTCAT
TCAAATTTATTAAAAGACCGGAAGTTTGTTTTTTGTCTGACACACCGTTGAAAATTTTAC
ATTCGCACAAGTTTTCACAGATATAACATTTGTTCTCAGAGTTCGAGTTATTTAAGTTCA
AATCAACAAGAAGGTCGACGAAGGCAACGGGTGCTGTGTTATCGTTTTGAAGGCCTAAAT
CGTTGATTAATTTCGTGTAGCTTTTGGTCGACTTGGTCGCCGTACTGAACAAGGCCCTGA
TGTCTCCGTTCTTTTTCCCGGGCGAGCTCGCCATCTTTTGTCTCTTTCTTGCCTGTTTCG
ATTTAACCGGAGAGGGCTTTTGCAATTTTGTGAAGAATTCTTGTGAAGCGAGACTGTTCT
GTGAATTTTTCAATTCGTTTTTTTTCGTTTTACTGAACTGAAGTAGTTCGGTCAGAAGAA
CTGTGTCCTCCGAATGTTCAACGTTCACAGTGTCCTGTAGAGTTCTCTGCAGTTCCAACC
ACTTCGACATATCCAAATTTGTTTCAACATTACTATCATCTTTTAGATATGTTTCTCTGT
CCATGGACCAGTATTCTTTGTGTTCAGCAAAGTATTTATTCTTAGAGATGGTCTCGGGCG
ACAATTTGCCGTATTGTTCATTTGTTATGAGTTCCGATTTGCCTTTCGATTTTTTCGTTG
TATTCGAAGGCTCCTTCGATTTGCTTAGCAGCATTGAACGAATGTTCTTCTGACCCTTTT
TACAATTCTCATTGTTTTGTTTCGTTTCGTTTCTCTTGGCGACCGTGATGTGCAGCATCT
GACATTTGGGCGTGAAGTCGTGCGGCATCATGCGCGGGTTGCGCTTGTAAAGGCTCTCCT
TGATTTCGTTTGACTGCAATAGTTTCGCGTTCAGTCCGTCCCTTTGACGCATACAATCCA
TTAATGTCTGATGCTCTCTTCCTTCCGTGACTAGAATATACACTTGTCCTCCACGTTCGC
GACCCGTCCTACCGCACCTTTGCACGAGCCTGACGGGCGACCTCGTGGAGATGTCGAAGC
AGAGGATGAGGTCGACGGAGCCCACGTCCAGTCCCTCTTCGGCGACGCACGTGGCGACGA
GCGTGTTGCACGCGCCCGCGCGGAACGCACGCATCACGCGCAGCTGCTGCGGCTGCGACA
CCACCGTCCTGCCGTCCTTACCTGAAGCTCCTTGTCCGACAAACGTCTGAGGAGTAATGA
GAGGACGACACTGCAGCAGCAGACAGTGCACCAAGTTCACACTCTCGCGATATTCACAGA
ACACAATGGCCTTAGTGTCCTGTCCATTTTGTTGGGCCTTCGTGAAATGTTCCATCATTA
TTTCTTTCAACTTATAGAATTTGGGATGGCCAAAACTTAAATTTTTAGGAATCTATTACT
GCGGTCTTTCGTTTGGAAGTCTTTGTACATTATGACTATTCTCCCTTTTGATAAATTTCC
TAGATTCTGGGGCAGGATGTTCAATTGTTTCAGTCGTCTTGCATAACAGTCTAGAATCTC
AACATATCTTTGTTTCAGGTGAGTCAGCTCTGTTCCTAAAGGTATAATAACCGTGTTGAT
TTTACGAGAATGACTATAACGTGCCACATCTATGCACTCTTCTGATCGCAGTTCTAAATT
TGCTATATGCAAACTTTTCACAACATTGACAACATCATCCACTTTACTACCTGGTGTTGC
AGATAATGCCAATATCCTATATGTCTTGTGTCCCATATCATCCAAGGCATTAATAATCTG
ACAGTATGCATAATTCTTCCTAGCTCTATGAGCTTCATCTATTACCAAACAACGGATCTT
ATCTCCAAGACATATACCTGATTTTATGTCATTGTATATAACTTGTGGAGTAGCAAAGAA
TACCCTTTTATTTTGCCAGTGTAATTTTCTTGTCGAGGTTTGCATGTGACCTGTCATTTC
TATAGTATCCCTCGGCGGTATAGCTACAATATTATAACAGGCATCTATTTGTTGAGCCAC
AAGTGGTCTGGTAGGTGCTGTAAAAACAATCTTGCCTAGTGGATACCATCTGTAGAAATT
GTACATAACAACAGCTGCTATGAATGTCTTGCCCAAGCCTGTGGGCAGACTCACCAAAGT
GTTTTTCACTAGTGCAGCATTTATGATATTGAACTGATAATCTCTGACTGGATAGTTTGT
TGGGTAAATCCATGTTTGTCCTAATAGTTTGTCATAGCCATTTAACTCCTCATCACAACA
TAATGCACTTACATTCAAATCATTTTTATTTAATGATCCATTTGAGGTTTTTACGTGAAA
CTTAGATTTATCGAAGGAAGTGTTTGCAAAATTCGCCAAAAATGTAGAATCATCAAATAC
TTCATCATCTTCGTATTCATCAATAACTTTTTCGTCCCTACAATTTCTTGAATTATTCAT
AGCTATTCATGATAGTCAATAATATAGATTATTTATTAATTTAGAATATTTAGATCATAA
GGCTATTTGAAGAAAAATCCGC
(5062 bp)

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