| Name | A_BomaMG_comp25690_c0_seq1 |
| Scaffold_id | |
NCBI non-redundant
(nr) | PREDICTED:_putative_U5_small_nuclear_ribonucleoprotein_200_kDa_helicase_[Papilio_xuthus] |
| Ontology |
| GO:0000166 |
F |
nucleotide binding |
| GO:0000381 |
P |
regulation of alternative mRNA splicing, via spliceosome |
| GO:0000398 |
P |
mRNA splicing, via spliceosome |
| GO:0003676 |
F |
nucleic acid binding |
| GO:0003724 |
F |
RNA helicase activity |
| GO:0004004 |
F |
RNA helicase activity |
| GO:0004386 |
F |
helicase activity |
| GO:0005524 |
F |
ATP binding |
| GO:0005634 |
C |
nucleus |
| GO:0005681 |
C |
spliceosomal complex |
| GO:0006397 |
P |
mRNA processing |
| GO:0007067 |
P |
mitotic cell cycle |
| GO:0007419 |
P |
ventral cord development |
| GO:0008380 |
P |
RNA splicing |
| GO:0016787 |
F |
hydrolase activity |
| GO:0030532 |
C |
small nuclear ribonucleoprotein complex |
| GO:0071011 |
C |
precatalytic spliceosome |
| GO:0071013 |
C |
catalytic step 2 spliceosome |
|
Transcript
Level | FPKM:4.35 TPM:4.03 |
| ORF Entry | |
Sequence
(Nucleotide) | GGCGGCGCGGCGCGAGCTCACGAACACTGCGCAGGGGCGGGTGCCCGCGTGCCGCCGGAT
CGCGTTGTAGATGGGCTTCGTCATGGCCGTCAGCCGGGTCGGCGCGTGCGATATGTTGAA
GCCCTGGATGTGCAATTCTAGTGGGAGGGATCTGACGCTGGGGTGGAAATTAAAGGTGGC
ATTAGCGTTGCAGCCGAGCCACTGGGCAACGTCGCGGGCGTCGGCCAAAGGTAGCGACAA
AGCCACTATACGGATCGGCTTCCCTGTCTGAGAGGCGATGTACCTCATCCTAGAGCAGAC
CACCTCCACGACCGGCCCCTCCTCGCCGCCCAGCAGCTGCAGCGCGTCCGCGATCAGCAG
CGACACGCTCTGGACGCTCTTGCGTACTTTCCATCTCCGAGAGAGTATGTCCCACTTGTC
GGCCGTGGTAATGATGATCTGCCCTTTGTTGAGCAGCTTGTGGTCTGTGGCCGTCTCGCC
AGTTAGCTGGACCACCTTAAGATTGAACTTGGTCCCGAACTTGTGGTAGCAGTGCGCGAA
CACGATGTCGGCCAGCGCGTCCTTGGGCAGCAGGTACACGGCGCGCCCGCCCGCGTCCCG
GGACAGCATCCGCAGCAGCGCCAGCTCCGCCACCAGCGACTTGCCCGAGCCCGACGGCGC
GCCCACGAACACGTTGTCGTCAGAGTTGTACACCGCGTTGAACACCTGCGTCTGCACGGG
GTTGAACTGCGGGAAGGTGTCGTTGTACAGCTCCTCGTACTTGGCGTTCCGGAGCGCCGA
GATGGGCAGCGGCTGCAGGTCCAGCAGCTCGGTCGGCGGGAAGTTCTTCTCGGGCAGGAT
GAGGTGCCGGAACGAGACCGGAAGCTGCGTCTCCGCCGCTATCCATCTATCAGACACGAC
CCTCAGGAAGTACTGAGGAGGCAGGGGCTCGAAGACCGGTACGAACAGCTTCACCTGGTG
CTCGTCCTTGCAGTACTTCTGCTTGAGCAGGAAATACTCGTGGTGGAGGATCACCTCAGA
GTCCACGTCTTCCACCAGGATCCAGAACGCCTCCGACTGTCCGTGGATTTTCTCGTCCCA
ATGGAAGTCCGGCGTGATGGTCAGCTCGACCCTGAGCGTGGATCTGGTGATGGGCTGGAT
GTGCGTCGCGAGCTCCAGCTTCGGAAACTGGTGCACGTACTTGTGCAGCATCTTGCCCAG
CTTCGGAGCGCGGACCAGCTCGCCGATCTCGTTGGGGCCCAGCTCGTACAGCTTCTCCCA
CGGGAAGTTCTTCTTCTCGAGTTTCTTTATGACCTCTTCGGGTATCTTCTTAAACTGTCT
CAACGGCGACATGGACTGCCACATCCTTCGGTCCACCATCTTGCACAGCGCCAGCGTCTT
GTCCACCAGCTGCGCCCAGCCTCTGTACAGTACAATCTCGAAGATGGCCCTGAGCAGCCT
GCAGGCGGACTGCGTGACGTACACCATGTCCGCCATCAGCGCGAACCCCTCGAGCTTCAG
CTGCGAGATGTACGCCTGCAGCAGCACGTTGATCTTCGCCGAAGACTCCTCTATGCTCTC
CTTTATAGGTATCGGCACCCTCTCCATGAGCTTGTGCAGCTCCAGCTTCTCCTCCTCGCG
GACGGCGATGTGCTTGAACTCGGCGGAGAGCGAGAACACGCGGAACAGCTCGATCTCGCC
GAGCGTCGGCTTCAGCAGCTGGTTGTACGACTGCATCGTCTCGTACGTGCAGTAGAAGTG
CGAGGCGATGCGGCCCAGCTCCGTCGGCTGGAAGTGGCCGGACTTCTTCTCGTATTTGAT
CAGGCCGGCCTTGTCCAGCAGGCTGGCGGCGGTGTGCACCAGGTCGGCGCGGTGCAGTTC
CAGCAGATTGTCGTCCTGCATCTTCTCCGGGGAGACTCCGTACAGCGCCGGCTGCCTCAG
CATGCGGATGTATAGATACGTGTAGCCCAGCCACGTGACGGCGTCCCGCACGCTCTGCAC
CGAGCCCAGCACGATCTCCGCGTTCAGCATGTCCGGCAACTTGCTCACCAGCTGCGACTC
TATAGGTAGCTGCTGGTTCAGCAGCGACAGGTAGTACTGCAGCTCCGAGTGGTTCGTTAT
CAGGATGCCTTCTCCCTTGGTGTCGTACTGCGGCCTCCCGGCGCGGCCCAGCATCTGCAG
CACGTCGAGCGCGCCCAGCTCGGTCCAGCGGCCCTTCTCCGGGCAGTACACCTGCGTGCC
TTTCACGATGACGGTGTGCGCGGGCAGGTTCACGCCCCACGCTAAAGTCGCCGTCGACAC
CAGCACCTGTATGTGCCTATCAGCGAACAGATCCTCGACCAGCGTCCTGTCCACCCTGCT
CATGCCGGCGTGATGTATGGCGAAGCTGTACGGCAGCAGCTCCCGCAGCTCAGGGTTCTT
GACCTGCTCGGCCTCAGTGCGCAGGACCTCCATACTAGCCGACCCCTCTCTCAAAAAGTG
TCCAAGCGTGTCCTTCTCGAGGCACATGTCGCGGATCGCGCGCGCTGTCTTCCCGGTCTC
CTTGCGCGAGTGGACGAATACTAATATCTGGTTCTTGCCTGCGTGCTCCATCACCTTCTC
GTAGACGATGTCGTTCATCACCTGGAACCGCTTGAGAGCCTTCTTCTCCGTCACGCCGAT
GTACTGCTGCTCGAGGGCCACCGGTCTGAAGGAATTGTCGAAGTAGAAGAGTCCCTTCTC
GGGTCGCACGCGCAGGAAGGTGGCCACGTCCGTGTAGTTGGGCAGCGTGGCGGACAGGCC
CACGAGCCGCACCTCCTCCCGAGTCTGCTCGACCGTCCGCAGGGTCCGCGCCACCAGCGC
CTCCAGCACGGGCCCGCGCTCGTCGTGCAACAAGTGGACCTCGTCTATGATTATAAGCCG
GACCAGGTTCGTGAAGGAACGTTCCCCGCCCTTCCTGGTGATGATGTCCCACTTCTCCGG
AGTACACACGATGAGCTGCGTGGCCTCGATCTGCTCCCTCGTGAGCTGGTGGTCGCCGGT
CAACTCGGAGACCTTCATGTTGTAAGCGGACAGACGCTTGCTGAAGTTGCCCACCATTTC
CTGCACGAGCGAGCGCATCGGCGCGACGTATATCATTTTGAAGTCGTTGACATTGACAGT
GCCGTCGTCGTTGACGTGCTTGCCGACCTCCCGCAGCACGCACAGCAGCGCCACGTTGGT
CTTGCCGGCCCCGGTGGGCGCGCACACCAGCAGATTCTCGTCCGACTCCAGCGCCGGCTT
CGATATGCGGCTCTGTATTCTGTTCAGGGTCTTGAATCCCTCGAACGCTGGCTGGACGTA
TTTGGGCAGCTTCTCGATCGGCACCAGTGTCTCGTTTTCTTCAAACGGCTTCGGTTTTAG
GGCAGGCACGTGGACTTCTTCGTAACCTTTCCGCTGCTTCCTGAATGAACCCGGTGGCAG
CTGGCACCTCTTGTTAGCCATGAAGTGCGATCCAGCCGCGAACACCAGGTCCTCGAGCTG
CACCACCTTCCTAGAACCCGCTACCTGCCCGGACGCAGAGCTGCTCTCGGCTTCAGATTT
GTGCCTCTTTCGAGGGGCCTCAGAGTGAGTATCCATTTTCTCATCATCTCCATTGCCGGT
CTCCAATTGCGCGAGGATCTTCTGCAGGTGAGGCTGCCGGGACATCTCCTCACGTATCGA
CACGCGCTCGCTCTCCGACTGGGAGGACGCCAGCTTCGTGCAATACAGAATCATGAACCT
GTACTTGTTCAATATCTTGACGAAGTCGAAACAGTCGTAGCCGAGCAGCAGGACCAGCCT
GTTCTCCAGGTCTCTGTCGTCCGCCGCTTCGGCGAGCGCCTTCAGCACGTCCGTGGATTT
CGCCTGAGACAGCATAGCGTCAGGAAAATGCCTGGACAGTCGTCTCTGCAGCCAGTAAGC
ATCTATATCCATCGGATGCAGCGACTGTGAGTGGCGTTTGTTAATTTGCTCCTCGCTTAG
ATTCGTGTGAATGGCATTCCTCTTCCCTTCCGTATCACTGTCCTCTTCTCCGCTGGATTC
TTTTTCTTTCTCATTCTCTGACCCTTCACCGTCTTCTTTATCTTCTTCTCTTACCTCCCC
ATATGCATCTTCATCATCTTCCTCAGAGGACTCTTCAAACTGCACATTGATGCCGTATGT
CTCGTCTATTTCGGTGTTGCTCTCTGTTGCCGTTGTCATGTTGAAGTCTGTTATTTTCTT
ACCTAAATTGACAAGTAAAGCAAATCTCTCGTCTGGTATGGAACCGAGGAGCATCTCAAT
TTCCTTCTTCTTCTCTGGATCTTTCAATTTATCATTCTTTAGAACTAAGAGTACCTCATC
ACAAGCGCCGCATAATATATCCCTTGGCTGGTCTCCGAGAGAGCTCTGCATGAATGCAAG
CAGTAGTTCATAAGTGTGTCTTGTGTGTTGGGCTCTGGGACGGTACAGAACGCCTGGAGC
ATCGTCAGCCCAAGCCACACGACTGGATTTTGATTTAGAGAGTTCATACGAGGCTTCATC
ACGTTTTTGACGTTTAGCCTTCCTCTCCTCAGCTTTATCTGGTTTAGTGCGTTGAGCTCG
ATCACCCATCTTAGTTCCCGTGAGCTTTCCAGACAGCGACAAAACTTCACCGGTCGCTTC
ATCTCGACCACGTCTCTCTATTAACCTTACATCAGCTTGCAGTACAAGATTCGAGTTGGC
CTTGTACTCATACTGCAGCTGTCTGGCAGCCGCGTCAGCCATGCTTCACTATATTACAAT
ACAAGAATGTAGCCTTACTCCTGTTATTTGACAAAAAATGCAAGTAGGTATTTTAAATTC
GAAATTATAATTTAAAATAACACAGTTTAAGGTTAGACCGCCGACGCCATTTTCACTTTA
TGTGTATAATCTAT
(4874 bp) |
