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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25665_c6_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_transcription_elongation_factor_B_polypeptide_2_isoform_X1_[Amyelois_transitella]
Ontology
GO:0003713 F transcription coactivator activity
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0016567 P protein ubiquitination
GO:0030891 C VCB complex
GO:0032403 F protein-containing complex binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0070449 C elongin complex
Transcript
Level		FPKM:20.79 TPM:19.25
ORF Entry
Sequence
(Nucleotide)
CGTAACACGTAGTACAGTCAGGAACAAAATGCTTATTACATTATTGAAATAAAATTTGTG
TATGATTTTTTTTAAATGTTAAATTGTTTAAATAAATAATTTAAAAATCATTAATTAATA
ATATATATATATATAAATATATATATTTTTTGAAACAGTAGAAGGAATATTTAAATCGAA
GCGTAACAAAACGTTGAACGGAACACAAATCGATATATTAATAACAAAATATTTTATCGT
GAATAAAAAATAAAATTGTTTAATGTTTTGCACCCGACTGCCGGATCGTAGGGGCCGGGC
TAAATGTTCAGATCCTGAACTGGTTTTTTTTTTTTAAATATACAAAATCGTTATGATACA
AAGTTGGTGTCTGTATCGTCTACGTCCGAATCACAGCCTCGTTTTTCGTTTAATGTTGAT
CCATCTGTTCCTGTCCATTGGTCTCTTGAGATTTCATAACATCTGGCAAGTCGGGGGGTG
AAGAATACGGGGTAAGTTCCAGTGCCTCAAATTCACCATTCTCCTTCCTCAAAGCTAATC
CAATTGGTGCTGGACAGTGAGCCTTTGCTGTGTTAGAGGTCAGGCCAAATTCAGCCAAGG
TCTTCTCATCTTCCATGAGCTGGCTGTCTTTGTTGAACAGCATTTGACTTGGAGGAGGTA
CCTTTAGGATACCTTCAATCATTTTCTTCAACTCTAATACTGTAGTGGTTTCCTTCGCAT
CAGTGAAGACAGTAAGCTTTTTTCGCCTTATCATTAAAAAGACATCCATTATGTTATTTT
GTTAAGGACAATATCCTTTATGTATAAAAGAAAATGCTACAAGGCGTACGAAATGAAATT
ATCGAAAACTACAACTTCAGACTTCCATTTCAGTCAACGACAATA
(885 bp)

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