SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25664_c1_seq6
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_hypoxia-inducible_factor_1-alpha-like_[Bombyx_mori]
Ontology
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001666 P response to hypoxia
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016607 C nuclear speck
GO:0035035 F histone acetyltransferase binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046983 F protein dimerization activity
Transcript
Level		FPKM:2.46 TPM:2.27
ORF Entry
Sequence
(Nucleotide)
TGAGATAAGGCCATCTTTGGTGTTATCAGTCGCTCGTTGATTTCGCGCCTCGATGGACTG
CTTCGTTGCATTGTCTGATGTGAGAATCCGTGTGTTACAATGCTCGTTTATGGGCACCAG
TATCCCGGTCAGCCTCCTGTGGTGGGACAGCCGGAGGCAACGGCATGGAACATTCAGTGC
CACGAAATGAACCAAAACCAGATTCCGGATAATCGCATGTGCACTCACAGTGGTTACAAT
TCGAACTACCATACAAATCAGTGTTACAGTAACGATCCAAATCAGTATAGTGTCCCAGCT
CCGTATTATCCCCCACAAGAGGTTTACAATTTAGGAGACGTCCAAGTGGGTTATTTAAGA
CAGCCCGTGATACCGAATCTTCCGTGCCAACAATCTCAACAGTGGGATTACAGTTCTATG
TGCTATAATGTTGATGGTCAGCCGTGCCAGTATACGAATGTTGTCGATTTGGAAGATTTT
ATGAATAATGAGAAACGCAAGGAGAAGTCGCGTGTCGCGGCCCGGTGCCGTCGCACCAAA
GAGATGCAGATCTTTTCGGAGCTCACAGCGGCCCTGCCCGCAAAAAAGGAGGAAGTTGAG
CAACTCGACAAAGCGTCCGTCATGCGTCTGGCTATATCTTACCTTCGCGTTCGTGATGTA
GTCTCGATGCTTCCAGATGTCAACTCGGATCAATCCAAGATGCAGAATCCCGAAGGTTTC
GAAGAGTTAGCTTCAGAGCTGTCATACATGAGGGCTTTGGATGGCTTCGTTCTGGTGCTT
TCTCAACAAGGAGACATCGTCTACTGTAGTGACAATATTGCTGAACATCTTGGAGTTTCG
CAGATGGAGATAATGGGACAGAGCGTGTTCGAATTCAGTCACCCCTGCGACCACGACGAG
ATCCGAGAGGCTCTGCGTACAAACGGCGGTGCCCGTCGCGATCTCCTGCTGCGTCTCAAG
TGCACACTCACCAGCAAGGGAAGGAATGTGCACCTCAAATCGGCTTCGTATAAAGTAATC
CACATTACTGGCCACATGTTGGCGTCGACTGAAGACAACGAACGTAACAATAACGAAACC
AAAGCCGACGAGGAGAAGAAAGGGAAGGCTGGTTGTCTTGTGGCAGTCGGTCGTCCCATC
CCACATCCATCCAACATCGAGATACCGCTCGACAGCAAAACGTTCCTGTCCAAACACAGC
TTGGACATGAAGTTCACTTATGTCGATGAGTCTTTGTTGAACACACTTGGCTTCGGTTCA
GAAGAGCTGGTCGGACGTTCGTTGTACGATTATCATCACGCAGCCGACAGCGCTTCCATG
ATACAACAGTTCAAATCACTATTCTCCAAAGGACAATGCGAGACTGGACAGTACCGTTTC
CTGGCGAAATCGGGTGGTTACTCTTGGGTCCAAACTCAAGCCACCGTGATCACCGACAAG
CAGCAGAAACCTATCAGCGTCGTCTGTGTCAACTACATCATAAGCGGTATCGAGTGCAAA
GATGAGGTGTTTGCCGCACACCAAGTGCAGCACGCCGATTTGAAACCGAAGTTGTCAGCT
GTCGCGTCGCCGGGCGTCACATTCCGTGCACCCGTCGAACCACTTGCTAACGGCGCTATA
GTCGCCATCGTTCCGCCGGAGGAAGAACGACCTATACCGGTCACGGAACTCATATTCGCA
CCGAGAAAGAAAGAAATGAATAAAGGCTTTCTCATGTTCTCCCAAGACGAGGGACTTACA
ATGCTTAAAGACGAGCCGGAAGATCTGACACATTTGGCGCCCACTGCCGGTGACGCTTGT
ATTCCACTGGAGAACAGTCCTTTTGATATGTTCGATGAGTTTATATTGAGCGATAACTAT
TGTAGTTTGCTCGGCGATGATTTAGCTAACGGATCGCCGGTAGATCCTCTAGCTCCCGAT
CCCTCATTACTATCATCGCCTGAATCACAGGAAAATGATTCGTCTTGCGAACAATCCTCA
TTACTGACAGAGCTGTCGCTGGATGCTTTCGATAATACAAGGTCGGACGAGATTGACGAC
AGCAATTCGCCATTTATACCTATAAGCGATGAGCTTCCCGTGCTGGAGCCGGCTGTCATG
TGGGGAGCCCTGCCTGACAGTGTTAGCCAAGCCAGGCCGCAACCTTCCGAGACGCACACA
TCACCGGCACCGGCATTACAACGCCTACTCACGGGTCCGCCTCCTCAGGATCTCATTACA
AGCATATACTCAGACCAAGGTCTAATGCCAAGCAGAAGCATATCAACTTGGGATACGGGA
GTGAAACGAGTGATGAAAGAGGAAGAAGAGCCTAGTGCCAAACGCGTGAAGCGTAGTCCC
TCCCCAGTTGCACCAAAACCGAAATCGCAATCGTCGAGTGTCCTCATGAACCTCCTGGTG
AGCGGCTGTGACGTGGACGCCGGCTACATCTGCATGGTTCAGTGCCGGCCACGTCAAAAA
GCGAAAGCTTGAAATTTGAGCTCTCCAACTAAAAATAAACTGTGATAATTCGCGTCCAGT
GTTCGACTATCGAGTATAGCAAATCTTACTGCAAGCAACTCTGTTCTGGTCGTTACGAAT
CGAAGTGCCGTCGTTTCTTGTGATATACTCAGTTCGACTTAATCAGTCCGGGGGACGATA
AACGCAGCGGGCCGGATTGAAGTCTGCCTAGACAATTCAATGAGGCGGATGGGACGTTGG
AGTCGATTAGAACTGCTTAGTGTAATTAATCTTCCACAGACTTGCAATCTCGTGCTTCGC
CCGAGGGCGTAACTTAGACTAGGAGACTTGCGGGTAAACCCGTTTTTATTCTTTATTACA
TACAACGTACGATTCTAATCGAACTATGTTTTGTTAAGTGCTTAAGTTAACGGCGCATAT
CGTTGTGGTTATGTGATTGACTGTTGAATCGTTCCTAGTATATTGTAGTTACCGTGTCGG
TTAATAATAAAATGACAATTAATATATTAAAGTATTTAATGAATAAGTGAACCGACTCTT
CAGTGAAATTTAAAATCGAATTGAACAGTTCGTATCGGTCGAATGCAGACCACTGCAATC
GGTTCACGGAATATAGCTCTGTATTATTTATAAATTTTATAATATATACTGTTAGTTTTC
TAGAAATATAAATTATGTTATATACAACGAAATAGCGTTCTTTAAGTCGACGACATAGAT
TCTTTTTTTGGGTAACGTGTATTTTACGAGAGTTTATGTAGGTAGTCGTAGTTTTCATGG
CAGTTTCGGAAAATAATAAATCGATAATGCACGCTCTGCATTAGCGGCCAGCTCTCGAGA
GCCGCGTGTTGAATATTCCTTTGTCGCCAATGCGCCGTGTCGCCACGTGCATACAGCTAC
TGCTACTACGACATTTTACGCTATTTAAAACAGCCAGAGGGAATCTTATGGGATTTTTCT
TAGTTTTACAAGATTGTGAGAACGATTAAAAGACTATTAGTATGTAACGGAATCTTTGA
(3479 bp)

- SilkBase 1999-2023 -