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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25664_c1_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_hypoxia-inducible_factor_1-alpha-like_[Bombyx_mori]
Ontology
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001666 P response to hypoxia
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016607 C nuclear speck
GO:0035035 F histone acetyltransferase binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046983 F protein dimerization activity
Transcript
Level		FPKM:2.33 TPM:2.16
ORF Entry
Sequence
(Nucleotide)
AACGTACTGTACAGTGTATTTTATTTGATGTGCCTATGTGGTCAAATTCGGTTTTCGATC
TCGTATTCTACTGTACAAGTTGATAACAAAGTGCATATTCTCGTATTCAATGCATTGTAA
AATGACCTAAATTGTGATCAGTGAGATATAATTGTGTTTTAGACATAACAAATACTATAG
ATAATCGTGGAAAGCGATATGATACTCTCCTTGGCAGTGTTCTAAGATTGTGTTAATATC
GTGAAGTTTCATAATAGTGTCTTTTATCATAAAAATCGAAATGTCTACGAAACCAGCAAA
TCAAAAAAGGAGGAATAATGAGAAACGCAAGGAGAAGTCGCGTGTCGCGGCCCGGTGCCG
TCGCACCAAAGAGATGCAGATCTTTTCGGAGCTCACAGCGGCCCTGCCCGCAAAAAAGGA
GGAAGTTGAGCAACTCGACAAAGCGTCCGTCATGCGTCTGGCTATATCTTACCTTCGCGT
TCGTGATGTAGTCTCGATGCTTCCAGATGTCAACTCGGATCAATCCAAGATGCAGAATCC
CGAAGGTTTCGAAGAGTTAGCTTCAGAGCTGTCATACATGAGGGCTTTGGATGGCTTCGT
TCTGGTGCTTTCTCAACAAGGAGACATCGTCTACTGTAGTGACAATATTGCTGAACATCT
TGGAGTTTCGCAGATGGAGATAATGGGACAGAGCGTGTTCGAATTCAGTCACCCCTGCGA
CCACGACGAGATCCGAGAGGCTCTGCGTACAAACGGCGGTGCCCGTCGCGATCTCCTGCT
GCGTCTCAAGTGCACACTCACCAGCAAGGGAAGGAATGTGCACCTCAAATCGGCTTCGTA
TAAAGTAATCCACATTACTGGCCACATGTTGGCGTCGACTGAAGACAACGAACGTAACAA
TAACGAAACCAAAGCCGACGAGGAGAAGAAAGGGAAGGCTGGTTGTCTTGTGGCAGTCGG
TCGTCCCATCCCACATCCATCCAACATCGAGATACCGCTCGACAGCAAAACGTTCCTGTC
CAAACACAGCTTGGACATGAAGTTCACTTATGTCGATGAGTCTTTGTTGAACACACTTGG
CTTCGGTTCAGAAGAGCTGGTCGGACGTTCGTTGTACGATTATCATCACGCAGCCGACAG
CGCTTCCATGATACAACAGTTCAAATCACTATTCTCCAAAGGACAATGCGAGACTGGACA
GTACCGTTTCCTGGCGAAATCGGGTGGTTACTCTTGGGTCCAAACTCAAGCCACCGTGAT
CACCGACAAGCAGCAGAAACCTATCAGCGTCGTCTGTGTCAACTACATCATAAGCGGTAT
CGAGTGCAAAGATGAGGTGTTTGCCGCACACCAAGTGCAGCACGCCGATTTGAAACCGAA
GTTGTCAGCTGTCGCGTCGCCGGGCGTCACATTCCGTGCACCCGTCGAACCACTTGCTAA
CGGCGCTATAGTCGCCATCGTTCCGCCGGAGGAAGAACGACCTATACCGGTCACGGAACT
CATATTCGCACCGAGAAAGAAAGAAATGAATAAAGGCTTTCTCATGTTCTCCCAAGACGA
GGGACTTACAATGCTTAAAGACGAGCCGGAAGATCTGACACATTTGGCGCCCACTGCCGG
TGACGCTTGTATTCCACTGGAGAACAGTCCTTTTGATATGTTCGATGAGTTTATATTGAG
CGATAACTATTGTAGTTTGCTCGGCGATGATTTAGCTAACGGATCGCCGGTAGATCCTCT
AGCTCCCGATCCCTCATTACTATCATCGCCTGAATCACAGGAAAATGATTCGTCTTGCGA
ACAATCCTCATTACTGACAGAGCTGTCGCTGGATGCTTTCGATAATACAAGGTCGGACGA
GATTGACGACAGCAATTCGCCATTTATACCTATAAGCGATGAGCTTCCCGTGCTGGAGCC
GGCTGTCATGTGGGGAGCCCTGCCTGACAGTGTTAGCCAAGCCAGGCCGCAACCTTCCGA
GACGCACACATCACCGGCACCGGCATTACAACGCCTACTCACGGGTCCGCCTCCTCAGGA
TCTCATTACAAGCATATACTCAGACCAAGGTCTAATGCCAAGCAGAAGCATATCAACTTG
GGATACGGGAGTGAAACGAGTGATGAAAGAGGAAGAAGAGCCTAGTGCCAAACGCGTGAA
GCGTAGTCCCTCCCCAGTTGCACCAAAACCGAAATCGCAATCGTCGAGTGTCCTCATGAA
CCTCCTGGACATCCCTCAACAGTCCGCGCCACATAAGCAGCCCATGAAAGCAAATTATCA
AATCTTACAAAACACACAAATATTAGGGCTCCAGAATGTACTACATAGAAATATGCAAGT
CCCCATCATAAACATAACGCAGGCCGTTCCTAATAAACATGTGATGCGCGCCAGTACTCC
CATCAATCAAATGCGAACAAACATGACAAGCGGCCCTATGTCCCCGCTCAGTCTCAACAT
AGGCAGCCCGATGTACTCCCTGCCTTCCAGCCCTAACAGCTATTCCAGTCCCGCCATGAG
CCCAGCGCAGAGAGAACGCGTTATGAGTCCTTACTCCACACCACAATCCTTATCCCCAGT
AGGTAAGTTTCATCAGATGTACAGCCCAGGTCAGAGGATGGTGTCTCCAACCGGCGTCAT
ACAGGGATCAGACCCGTATCTGACGACGAAAATGCAGCCAAGCCCAGGGTTCCCGATGCA
GGTGAACGATATGCTACTGGACACGAACGTGCAACTCACAACATCGGATTTCTGGGCCGA
CCCGGAGTTTCTTCAGGGGACCAGCGACTTGTTAACTGCTTTCGATGACGTCAAACTTGG
GTAGACGCGTGCCGTTTAAAATGTATGTTGAACGTATGAATGTGGAGTGATTTCGAGCTA
GGAGCACTGGTGAGAGGATTCATTTCTCGCCCTTTTGAATCGTTTTCTATGTTTCGAAGG
GTAATGAAGCGTATGAAAAACAAAGAACTGAATTATGTATGTGTGTACGAGATTGAACTC
CCACAAACATTCTGACGGATGGAATAATTTTATGAGTCGAAATCACTCGAATGAATGCAG
GGCCGAAAATTGTAAGGAGCGGTAGTTAAGGCTTTCCAACCAAGAAGGATTCCAGAAGGG
TCTCTGTATTTTTTTACCAAAGTCTACTATGAAGAAGATCATAGATTTAATACGATTTAA
TAAAGTCAGTCATTGACTTGTGTATTTGGAGTCCTTCCTAATGCAATATCTTACAAGCCT
TTCTCCGTCCGATATGTGGGCCATTCATTATGATCCCATATCAACAATTGATTTTAATTG
TTGACATGTAATTTTTAAATTTTTTACAATTTATAAAGATCGATTATAACAAAATCAGGG
CAGATGATAAAGCTTATTTGTTTTTAATGATTTGAACAATTAATATTGAAATTATATAGA
ATGTTTAAAATTATAGATTTATTATTAAATTTTTTATTATTCGATAATCGTCCACGAATA
TTTTACAATAATATAACTTTATTTCTGTCGTGGTTTTAAAAACTATAATAGTTTATATTT
TATTGTATAAGAAAATTGATTAGTTGAAACCATTCGG
(3577 bp)

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