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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25652_c3_seq5
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_zinc_finger_BED_domain-containing_protein_1-like_[Amyelois_transitella]
Ontology
GO:0000228 C nuclear chromosome
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004803 F transposase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0015629 C actin cytoskeleton
GO:0046872 F metal ion binding
GO:0046983 F protein dimerization activity
Transcript
Level		FPKM:2.05 TPM:1.90
ORF Entry
Sequence
(Nucleotide)
CAACTGTGTATATGAAAAGTGTCCGTCGTAATTTGATTATGGTGGCGCCACATTAGCATC
AAGGTATTTTAAAAGAAGCGCCAAATATTATTAGAGTGAGTTTGATAGATACTTTTTCAT
AGAATGAAATTTAGTAAATCAATAATAGTACCATTCACAGTTTACAAAATAAAATCACTC
TAGGTTAGGGATGGACGTTTAAAATATACATCGATGTTTTTTTCGATGTGATGCATCGAT
CGGTCACATCGATGGTAATACGATGTATTGGGAAATACATCGATGTTTCTTATATATCGA
TTGTTTTAGGTTAGGCATTAATTAAAACAAAAATATGTATTAATCAGGAAATATATGTAT
TAAAATTAAAAATCACCGAGACAACACATTTTTTTTACATATTCCAATATTTTTTGTCAA
TGCTATGTAAAAACAAAAGTTTGCTTAATCTCTTCCCCTTCAGCCGGTTTCTTTGTTCAG
TCATAACTAGCCCTGCCTGTGAAAAAAGTCTTTCTGAAGGGACTGACGTGCCAACTATTG
TTAAATACTTAAAAGCTATTTTGTACAGCTTCGGGAATTGTATTTTGTAATCTCTCCAAA
TTTCTAACGGATTTTCTTTAAGTCTTCCAACAGGAGTTCGGAGATAAACGGAAAGTTCGT
CAGACAAAACGTCTTCAGATTTGTTAATTTTCCAGTTACGATGCACTAACTTATGGTGAT
CAGTCCATAATGAAAAGGCCTCTTCATTTTTATCGGACTTGTCAGAATCGGACTCAGGTT
CTTCATTGCTATGCAAATTCTTCTTCATTAAATCTTTAATTTTCGTAACAGCATTCGAAC
AAGCTATCGGATCATTGAAATACATTCTTTTAAACCGTGGATCTAAAATACTTGCGATAG
CCAGAGCATTCACATGTTCTATTGAACCCATTCTTTTATTTATTTCATTAATAGCAAGTT
TCTGCACCTCTTTCGCTACGGGATCTTCTATAACAGCTGAAGTTATTTTAGAGAGCATGC
AACGAACTAAGGGAATAATTTTACTACTTGTGCAGTATTTATCACCTGAAATTTCTTTTG
TAGCCGCTTCTAAGGGTCGCAATACCATGATGACAGACGATACAGTAGATATTTCCGATG
CACTCAGCATTGCAGGTGCTCTAGGGTGGCGGAAGAGAATATCATTTATGACACTACGGA
GTTCTAGAAATCTTTGTAACATATAATATGTACTGTTCCAGCGAGTATCCACGCTTTGTA
TTAATTTTACCTCAGCTGCTCCAGCAGAAGACTCCGTAGCCGCAGCAGTAGCTTTACGTA
ATTCATCACTAGCAATGCAACTCTGTTTAAACCAAGTCACTATTGATTTTACTTTAGAAA
CAATGTTTCTCCACTCAATACATATCATTGTGCCTTCAGCCACCAAATTCAGAGTATGGG
CAAAACATGGGATGTGTTTCCTTCTACCAAACGCTAATTCGATCGCCTTAACTATATTGG
CTGCGTTGTCAGTAACAACAACTGTTACATTCTCTTGATCGATTTTCCAGTCTTGACATA
CCTTTAAGAGAATTTCAGAAAGATAATCTGATGTATGTCTTTCATCCAATTCGTACACAC
CTAAGGTGACTGAATATAGTTCAATGTCTATTCCGAAATGTGCTGTGATGCCCAAAAAAC
TTTTCATATTCAAGGTATCCGACCAAATATCTGTTGTTAGGGTTATATCTTCTATAGAGG
ACAACATTTTCTTAATTGTTTCTGAAATTACTTCATATTTATCGTCCAGCCAGCGTCTTA
GAGTTGTTCTACTCGGGAGCTTATATTGAGGAGCAACTGTTTTCATTAGAGTTTTGAAGC
CTTCGTTTTCAACGATTGAGAATGGCTGATGGTCTTTGCAAATCATGAATAACAAACAGT
TGTTCAGTTTCCTTGTCTTCGCTCCAGATTCTGAGTAAGAGGAAATATCTTTAAAAGCGG
CCTGTATTGTTCTTTGGCGTTTTAAAGGTGTAACGTTTTCGTCTAAGTCTGAATCAATGG
TTTCATTTACGGTTTTTGGTAACGGTGCACCGGATCTTTGACTGCCACTGCAACTTGGAA
CAGGTTGAAACTGAAGTACTCCATCATCCATTTTATTATAAGGCGTAACTTTGGTATCCA
GATCCAGAGGATTCGATATTTCGTCTGTAGTAGTTACTGCATTGAATGTAGTTTGTTTCG
GCTGAATTTCGAGATAAGCAGCCTTATGAACATTACGAATATGTCCAATTAAGTTCGTAG
TGTTTCCAGCAGACTTAATTTCCTTTTGACATAGTTTGCATTTCGTTTTCTTATCGTCAA
TTTTGTTAAAGAACTGCCAAACGGAACTTTTTTTCTTAGGTCCCATTATAACTGAAAGTA
AAAAACAAAACTATATAGGACTGTTTACAGGGAATTTATAATAATACCTATTAACTGCCT
AGTAGAATACAAATAAGTATAAGCCGCATTTTAATCGATAATATTAATATAGTAATTATC
GATAACTTGGCATCACTACAATAGATAGTATTATTATTTCACGGTAAAAAATATAACCTT
TCAATCAAATCGTATCATATTGCGAAATTAATGCATTCGTCGTAAAGTAGGTACATAATC
TTCTCTTTTATATCTTAGTTATAAGCACGCGCAATATAAAACGTAAAATATAATAATTGC
TTTGTACTTTTTGACAACAAAACAATGTGTCATTTCCAGTAAAGTTTCACTAGCAAAACC
ATTATCATTATCACTAAATACATTATTCTATTTATTAATACACATACCTGACATACCTGT
TCATAAATTAGTTTCTTTTTTAGATTTAAACAAGGCAAAAACTCGTATCCTAACAAAAAC
ACAATATACATTTACACAGCAGAAACTCGGTCGGCCATATTGTTGTTTTGGTTTAATTAA
TATTGGCAGCACTGATTATAACGTTTCGTTTCTCTTTTCACTCATAGTATAGTAATCTCA
TAATTTGCGTACCTAATCGATGCATCGAATGAAAAACATCGATATATATTCGATGTTGAA
GTATTTACAATACATCGGTTCAAGACGATGCATCGTTACTATACATCGAGTATTTTAAAT
AAATCGATGTATATCGTCCATCGCTACTCTAGGTGCACGTTTTCTTGTAATAATTCTATA
AGGTTTATTGCATTATTTTGTACAACGTAAGTTGTTGAAAATTTCCATAATTAACTACTT
TAGTTGAAATTATTTTTTCTTTTTACTCTGCATACTTCAGTTCATCTAGAATTGCTACCA
TACCATAGGTGAGAGGGTATTTATAGCATACAGTTGCATAATTTTTCAGCTTTTTCCCAT
ACGAGATGATTCTCCTTACCTCTACCCTCCAT
(3392 bp)

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