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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25643_c1_seq6
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_lys-63-specific_deubiquitinase_BRCC36-like_isoform_X1_[Amyelois_transitella]
Ontology
GO:0003674 F molecular_function
GO:0004843 F thiol-dependent deubiquitinase
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006302 P double-strand break repair
GO:0006508 P proteolysis
GO:0008150 P biological_process
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0010212 P response to ionizing radiation
GO:0016787 F hydrolase activity
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0045739 P positive regulation of DNA repair
GO:0046872 F metal ion binding
GO:0070531 C BRCA1-A complex
GO:0070536 P protein K63-linked deubiquitination
GO:0070537 P histone H2A K63-linked deubiquitination
GO:0070552 C BRISC complex
Transcript
Level		FPKM:1.70 TPM:1.57
ORF Entry
Sequence
(Nucleotide)
CTTTATTTGATTTAATGATAAAATTCAATGTCATGTTGAAAGTAGTTCTCATACTGCCTT
TCTTACTGTAAGTTTTTTTTATTTATGTGATGGGTAGACGGCTCATCTAATTTTGAGTTA
TTTCCGGAACCCATAGACATCAATAACTTAAATGCCACCAACCACCTTGAGACATGAGTT
CTAATGATAAGTACCACAGTCCCATGATTTCTCTTTAAATTATTATTCAGGCTTCCATTG
CATATCCTATATGTTTCTCTGACTCTCATAAAATAAAAGAAAAACTCCTGGTTTAGATTA
TTGGAAACCAGAAGATATTCCACTTGAAGAAGCAAGCGATAGCTCTGAAAACAGCAGTCT
TGTTACAAGTTTCTCTGTTGATAAAATAAACACACTAGAAAAGGATATTGAAACATCAGA
CTCCAGTGAAGATGAATATATACCTCTAGATCCACACCTGAAAGACCCACAACTACAGAC
AACTTTGGAAGTATCCGAACCAAACACATGGACCAACAGTGCTTATAATACATTATGGAA
TTTTACTGGTGCTTTAAGTAATATGATGAAGACCACAAACGAAGCAACAAGAAAACGAAT
GTCAAGTAAAGATTCATCAGATGGATTTGAAATTATTGATAAAAATGAATTCACTTAGTT
ATTAATTGGTTTACATAATCTTTGAAACAAGTTTAGGTCAAGCATGTCATATTTTCTAAT
TTAGACATCATCTGCTGATGCTGTTTCTTCAATGCTTTTAAGCGTATACTGTTTAATAAA
TTTCTGGCCACTAAACCTTCTAGCATTGGTCGGGACATCTTATCAACAATGTGGCCAATA
GCAATAGTCCTTACTGCAGCATTATGTTGCTTAGTGACAATGTCATCAGTATCATCATAA
CTAATTTCATTATTAAAGGCTTCATCTTCTTCCTCTTTTAAAATTGTTGGAAGCTGAGTT
AGTGTCTCGAAATTGTTTGTTAACAAAGAATCAGTGTTAGTTACAATTTCCATTTCTATT
TCAATCCGACTTTGACTAGCTCCTTCATTAATTGATTGAAAACAAGTAATTTGAACTGAA
GGGGCTTTTGTTGATTGGTCTGTAAGAAATACTGCAAAAATAATTCCAACAAAACTAGCA
TCCATCCTTTGATACATTGATTGAGTAGCCAGATCAACATGGGATGGCCACACTGTTATA
TGAGGATGCGAATGGTACCATCCAACAACTCTAAGAGGTTTGCCAACTTCTGCAGCTAAT
TCTTCAGCTCTAACAGTTGCTTGAACCAGTTGTTCTTCTGATATTTCAACACGGTCAGGT
TTTTTATCCAAACGGCGAAGTATTACTGATGACACTATTGAAACAAGCGCACCATTATCA
TGAACCTCGCCTATAAGTAAGCCCATGATTTCTTCTTTCTCTGTCGACAACGCATGTTGC
ATACAGACCAAAGCAACATCAGACGATAAACGGACCTTTTGTAGCATTCCAAAATTTATA
TTTGTAATTGTTCTGCGGCTAAACGTTACACTTTATAATATTATTAGAATTAAACAATAA
TCCTAAATTCCTAATAAACAGCATAGATAATAC
(1593 bp)

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