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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25642_c4_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_smad_nuclear-interacting_protein_1_isoform_X3_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0031047 P gene silencing by RNA
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0044822 F RNA binding
GO:1903955 P positive regulation of protein targeting to mitochondrion
Transcript
Level		FPKM:1.12 TPM:1.04
ORF Entry
Sequence
(Nucleotide)
ATTATATCAGGTTATCTATGTTATGTCGAACTATAAAATATTTTTGTGCTGAATTTATGT
GTTCATTAGGAGGGAATTTAGACGCTCTCAATCTGCAGACAATGCAAGAGAAAGAGAAGT
TCAAAGGTTCTATAGAGGTTCTAGCAAGGAACGAAGGCAATATCAGGAGCAATATGATCA
AGAACACGAAAGATTTGGTTCATATCACCATGAACACTTTGACAATAAACAGAAGTACAA
TCAAACTTCGCAATACAATCAATTTAATGATAGTGGTGGAAGACAAAGAAATTTCAATCA
ATTTAAAAGGAATCAAAGATATGAAGATTATCGTCGTCCTGATGATGGCTATCAAATGAA
ACCCAGAGATGAAGCGTACCATTCTAAACCTGACCCAAGGGGTTACGACAATAACCGATA
TGAGCAATACGGTGAGAGAAATATAAAGAGACGCGATTATGAAGAAAGCGAAGATTACAA
GGATCGTCGTGGGCATCCTGAGAATGAGCGTTACCATGCACCGCCACGCGACTACCAGGA
CAAGCGCGAGTTTCCAGATAAACGTCAGTTCCCAGACAAGCGTCAGTTTCCAGACAAGCG
CCAGTTTCCAGACAAACGAGAATTTCCAGACAAGAGAGAGTTTCCAAACAAGCGCGAGTT
TCCAGTCAAGAGTGAGAAATTCCGTGAAGAACCGTACCCGTTAGAAAGGAGTCGGGAGCC
GCGTCGAGACAAGCTACTGCCCAGAGTTGAGAGACCTCCATTGCCTCCACACAGGGAGCG
TTCGAGATCCCGCAGTTTCGAGGAGCGGCCCAGGGATCGCAACAGACGGCCGGAGCCCAG
GGACGAGCCCCGGGACGAGCCCCGGGACGACGAGGCCTACCGCCGCGCCCCCGACCCGCG
CCGGGACCGACCCCGCCCCGATGAATCTCGACCCGACAAACCTCAACCCAGGCCCAGGGA
GAGAAAGTCAAGGTTCGCTGACGCCGAAGACAATAAAGAATACAACTGGGGTAAGACGGA
AGTGAAGAAGGAAGACGCGAAGAATCCGAATGAAAAGGACAAGCCGAACTTTGGTCTCTC
CGGTAAATTGACAGCCGACGCTAACACTGTCAACGGTGTTGTCATCAAATATACAGAACC
GGATGATGCTAAACAACCCAAAAGAAGATGGAGATTCTACCCGTTCAAAGGTGACAAAGC
ATTGCCCATATTGTATATACATCGGCAATCGGCGTTCTTGATCGGGCGCGACAAGAAAGT
GGTGGATATCGCACTGGAGCATCCCTCCATCAGCAAGCAGCACGCCGCCCTGCAGTACCG
CGCCACGCCCTTCACTAGAGCTGACGGCTCGCAGGGACGCAGAGTCAGACCTTACGTCAT
TGATCTTGATTCGGCCAACGGTACATTCGTGAACAACAAGAAGATCGAGCCGCGTCGCTA
CGTGGAGCTTCTGGAGCGCGACGTCGTGAAGTTCGGCTTCTCGCAGCGGGAGTACGTGCT
GCTGCACGAGAACAGCAAGGACGACGCGCAGGACGACGACCAGCTCGAGCCCGCGCTCGC
CACCGCCGACCACATCAAGCACGAGAAGCGACTCAAGCAGGAGGTCGTCGAGGACGGCGA
GTGACCTATATATATACATATATATATGTATAGAGGGGTGAAAGGCTATTTGGTT
(1675 bp)

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