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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25642_c4_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_smad_nuclear-interacting_protein_1_isoform_X3_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0031047 P gene silencing by RNA
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0044822 F RNA binding
GO:1903955 P positive regulation of protein targeting to mitochondrion
Transcript
Level		FPKM:4.66 TPM:4.32
ORF Entry
Sequence
(Nucleotide)
GAGAAAACAACATAGGACGAAGTAGTTAGAAATGGGCTTTTAGTTTGTTACGTTTTCCCT
TTAGATTTTTGTTTGATTTGTGTACGATTGATTGTTGTTTAATCAAACATGAAATCTAAA
AAAAAACAACATACTTCTTCTGAAGAATCTGAGGACACTAACGATAGTGCAAGAAGCAGT
TCGTCCGAGAGTGATAGCGAGGTATCTTCAGCTTCTGAACATCGACACAAGAAAAAAAGA
AAACGTGATTCATCTTATTCAGAGACAGAGTCTGATGATCAAAAACGTTCTAAAAAGCGC
AAACATAAAAAAAAGAAAAAGAAACATGGGAAAAAGAAGCGCCGGTCGGGTTCTGACGTT
AAACCTGACGAATTTATACTGAGCGAAGGCGAAGAAACATCTAAAAAGAAACGAAAACAT
AAACATAAACATGTTAAACGTGCCCGAAGTTCCTCAGCTAGTGAAATAGAAGTAGAAAAG
AGTCAGCGTCGCTTGCACAGCGTCGTGAAGGAACGTCGGGATTCATTAGAAGAAGTGCAG
CCAACCCGAACTTATTATCAGAGGGAATTTAGACGCTCTCAATCTGCAGACAATGCAAGA
GAAAGAGAAGTTCAAAGGTTCTATAGAGGTTCTAGCAAGGAACGAAGGCAATATCAGGAG
CAATATGATCAAGAACACGAAAGATTTGGTTCATATCACCATGAACACTTTGACAATAAA
CAGAAGTACAATCAAACTTCGCAATACAATCAATTTAATGATAGTGGTGGAAGACAAAGA
AATTTCAATCAATTTAAAAGGAATCAAAGATATGAAGATTATCGTCGTCCTGATGATGGC
TATCAAATGAAACCCAGAGATGAAGCGTACCATTCTAAACCTGACCCAAGGGGTTACGAC
AATAACCGATATGAGCAATACGGTGAGAGAAATATAAAGAGACGCGATTATGAAGAAAGC
GAAGATTACAAGGATCGTCGTGGGCATCCTGAGAATGAGCGTTACCATGCACCGCCACGC
GACTACCAGGACAAGCGCGAGTTTCCAGATAAACGTCAGTTCCCAGACAAGCGTCAGTTT
CCAGACAAGCGCCAGTTTCCAGACAAACGAGAATTTCCAGACAAGAGAGAGTTTCCAAAC
AAGCGCGAGTTTCCAGTCAAGAGTGAGAAATTCCGTGAAGAACCGTACCCGTTAGAAAGG
AGTCGGGAGCCGCGTCGAGACAAGCTACTGCCCAGAGTTGAGAGACCTCCATTGCCTCCA
CACAGGGAGCGTTCGAGATCCCGCAGTTTCGAGGAGCGGCCCAGGGATCGCAACAGACGG
CCGGAGCCCAGGGACGAGCCCCGGGACGAGCCCCGGGACGACGAGGCCTACCGCCGCGCC
CCCGACCCGCGCCGGGACCGACCCCGCCCCGATGAATCTCGACCCGACAAACCTCAACCC
AGGCCCAGGGAGAGAAAGTCAAGGTTCGCTGACGCCGAAGACAATAAAGAATACAACTGG
GGTAAGACGGAAGTGAAGAAGGAAGACGCGAAGAATCCGAATGAAAAGGACAAGCCGAAC
TTTGGTCTCTCCGGTAAATTGACAGCCGACGCTAACACTGTCAACGGTGTTGTCATCAAA
TATACAGAACCGGATGATGCTAAACAACCCAAAAGAAGATGGAGATTCTACCCGTTCAAA
GGTGACAAAGCATTGCCCATATTGTATATACATCGGCAATCGGCGTTCTTGATCGGGCGC
GACAAGAAAGTGGTGGATATCGCACTGGAGCATCCCTCCATCAGCAAGCAGCACGCCGCC
CTGCAGTACCGCGCCACGCCCTTCACTAGAGCTGACGGCTCGCAGGGACGCAGAGTCAGA
CCTTACGTCATTGATCTTGATTCGGCCAACGGTACATTCGTGAACAACAAGAAGATCGAG
CCGCGTCGCTACGTGGAGCTTCTGGAGCGCGACGTCGTGAAGTTCGGCTTCTCGCAGCGG
GAGTACGTGCTGCTGCACGAGAACAGCAAGGACGACGCGCAGGACGACGACCAGCTCGAG
CCCGCGCTCGCCACCGCCGACCACATCAAGCACGAGAAGCGACTCAAGCAGGAGGTCGTC
GAGGACGGCGAGTGACCTATATATATACATATATATATGTATAGAGGGGTGAAAGGCTAT
TTGGTT
(2166 bp)

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