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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25631_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_toll-like_receptor_3_[Bombyx_mori]
Ontology
GO:0002224 P toll-like receptor signaling pathway
GO:0002376 P immune system process
GO:0002755 P MyD88-dependent toll-like receptor signaling pathway
GO:0004872 F signaling receptor activity
GO:0004888 F transmembrane signaling receptor activity
GO:0005515 F protein binding
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006952 P defense response
GO:0006954 P inflammatory response
GO:0006955 P immune response
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030670 C phagocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0034130 P toll-like receptor 1 signaling pathway
GO:0035354 C Toll-like receptor 1-Toll-like receptor 2 protein complex
GO:0035663 F Toll-like receptor 2 binding
GO:0038123 P toll-like receptor TLR1:TLR2 signaling pathway
GO:0042116 P macrophage activation
GO:0042495 P detection of triacyl bacterial lipopeptide
GO:0042535 P positive regulation of tumor necrosis factor production
GO:0042742 P defense response to bacterium
GO:0045087 P innate immune response
GO:0045121 C membrane raft
GO:0045410 P positive regulation of interleukin-6 production
GO:0046982 F protein heterodimerization activity
GO:0050707 P regulation of cytokine production
GO:0071723 F lipopeptide binding
GO:0071727 P cellular response to triacyl bacterial lipopeptide
Transcript
Level		FPKM:28.32 TPM:26.22
ORF Entry
Sequence
(Nucleotide)
AAAACGTACAAAAATAATAATGAAAGAGATACACGCACACACTAAAAACCTATCTAACTC
AATTGACGTGTAGATGATTCGCTGAGAAAACAGAGACAGAATTGCGAAAAGTGTTTAATG
TGACATTTTTTTTTATCGAAAACGAAAACAGTGTATTTCTAAGCGAGTCCTAAAACTATA
CAACTAGTGACATTTACGAATTAAATATATTATGCACCATGAAATAATAAACAATGAAAT
TCTGTGTAATCGTGTTTCGATCGAAAATTGTTTTCTGGCGTTATTTTTTCTATAAATTAG
ACTTTGATTTTTAATTAAAGTAATAATTTATTGAAATCGCCTCTCCGTTTAGTGTCCGGA
GAATGATATTGAAGATCATTAAGCTATTAAATTTCATTCTGCTCTTCATCGCATCAGCGG
AAACGAGGAAAACACAAAAATGCTTAACCGGCTACATGACGGACGTTCAAACCTGGGTGA
ACGAAGATGGCGTTCTCACGAAAACAATCGATCAAAGCAACGCTATAGATCTGTCTTCGC
ACTTCGATCCGGTCCCGTTCCTTCATCAGATCATGAGTGAATTCAACACGAACGATGGGC
AGCGCGTCCGATATTTAAGTCTGGCGAAATGCCGACTCACCAGAGTACCACCAGTATTCC
ATTTGCCAGACTCAATGGGACGTTGGCTATCGCAGACCCTTGAGTATGCGACTTTCTACG
GAAATAATTTCGTAGACAGAAGCGCGGCCGGCGAACAGTACAACATAATGATAAACGCTA
CCGGCGCTGTCGAAACTGAGCCGGTGTTCAGCTTACAGTACCAAGGTACGACAGTCTGGT
CCACTTCAATTGAATACGTCAGCTTTCCGAGCCTAAAGGAGCTGGATCTGCGAAGGTGTT
CAATCCAAGTGCTCAGAAGCAATATGTTCAGGGGTATGCCTTCACTGGAGGCTTTATATA
TAGGGGAGAATGAGATTTATCAAATCGAATCCAACACTTTTGCTGGTCTAAATAATTTAT
TACATCTAGACTTTAGCAGGAACGAAGCGTTCGACAGTACGGGGTCTCTTAAAAATCTAA
TTACCCCGCAAACACCGCTATTCGAAGGCCTAACAAGTTTGGTATCTCTAGATCTTTCGT
TCACAAAGATGTCCAAACGTAATGTGGCAATGTTAACAGGCTTAGGACCGAATTTGAGAA
GGCTGTCGATATGCGATACAGGGCTGCAGAATTTGAGGAGCGACATGTTCTCCAAAACAA
ATCTCACATATTTGGATATTTCGAAGAACAACGAGATATTGAACACGCCTAACATATTGC
GAGGGCTTGAAGATAATTTAGTGGTATTGTACGCTAATACTATAGGCACAAATCGGGTCG
ATATGCTAAAGAATTTCCACAGACTGGAGATATTGCAATTGCTGAACAACGAAATAACGT
ATGTACCACAAGAAGTCGCGGCAACTTGGAGGAGCCTCCAGATTTTGGACTTAAACAAGA
ACAGGATTATAACGTGGTTCGAACCGATATTTTCGCTGATACCTAACCTCAAATTCTTGG
GACTCAAACACAACAACATAAACGTGATCCGCGAAGACATGATCGTGGATTTCAGGAACA
TATCCTATCTGGCTCTGGCCGGAAACTTCTTCATGTGCAACTGCAACTCCAGAGATTTCC
TCGAGACGGCGGCTAGGAACGAGAGAAACCGAAAAAACGGATATATAAAGTCTGTTTACG
AATCGAAAAACCTGTTTCTGTACCATAGAGGGTTCGAAGATTTCAATACGCTTATAGCGC
AAAGGAAACCCGTAATTTTCGAAAACTCCATCAGCGAATGGGATAGCGAGGAAGAGAGTG
TATACCTATTGACCGATTTCTATGGTCGAAACTATATTTGTGCGTCGTTTGCTTCGAACG
AAGGCGAGACCATCTTCATGGGGGACGTGCCCAGCTGCTACGCTCGTCGAGATATACAGT
ACGACGAAAAGATGATTAAAAATCAGTACAAATTAATTGCTTTAATTCTGTTACCGTGCG
TTTTATTACCGCTGCTGATGCTGTTCGTATTCAGAAGGACGATTTTTTATTTTCTAATAA
TGATGCGGAATTCTGCGGCCCTCACCATGATCAATAAGGATAAGACCGGTGTCGATGGTA
CAATATTCAACTACGATGTATTCGTGTCGTACTGCAACGAGGACAGGGTGTGGGTGCTCG
ACCATCTCTTGCCGCAGTTGGAGTCCGATTGCAACATCAGCGTCTGCCTCCATGAGAGAG
ACTTTCAGATCGGACTGTCCATCCTGGAGAATATCGTCGCCTGCATGGACCGTTCCAGGG
CGATCATGCTGATCATATCAAAACGTTTCCTCATGAGTCAGTGGTGCCAGTTCGAAATGC
ATTTAGCCCAGCACAGGCTGTTAGAGACGCGTCGGAACGATTTGATCCTTGTTCTGTTAG
AAGAAATACCGCGGCGCATCCGCCCAACGACCCTCCACTATCTGATGCTGACGAAGACTT
ACATAATCTGGCCGAAAGTCGCGCACGAAAGAAACATTTTCTGGAGGAGGCTACGAAAAG
GCCTGGTGACGCAGAAACTGAAGCACACGGAAAACGTATCTTTAGCTTGAATTACGTTTA
AACAATAGGACCACAAGGTGAATACGACTCATAGTGTAAAATCGTGTATAGTTTTGATCA
TAATCCCTGAGCAGAATTAGATGACATCTTGTTTCCTGCGATTTAAATCAACATGTTTTC
GACACGGTGACCATTTGTATTTATAAGACATAATAATTTGAAACGCCTAAGACCTAAATC
GCGACCAGTATCATCTGGCCTGGCTGAATATTTTTAGCATTCGGGTACCAAACCCTCAAC
AATCGAATGTCACCACGAAAAAATGATTTCCCGTAATGAAAATCAAAATTGCTAGGGCTT
ACCGCGATCTCCGGCATTATACCCCCCATCTCATTTTCCGTCTCATGATGTCCACGGGCT
ACTGTTACCACTTCGCTCTAGTTATCTCGCAGCTTTTTGTCCATCTGATCGGCGAAATTG
AGCTTACAATCAAATATTGTGTTTTAGATTTTTCCAATATCCTCTATCGTAGTGTTCGAC
ATGTCTTTTGTAGCAAGCAGGTGCCTATCCGAGAACAGAAATATTCAACAAATGCCTGAA
TCGCACCAACAACATTTTCAACATAAATTTGCGTATATACAAGCACCGAATTGCAACGAT
ATCTCAACTCGATCGATTCTCGATCTTCCCTGTGTCGTTTCTCACTACATGAAAAAGTTA
ATTAAGAGAAGATTTGTAAATAAAACTAGATAAGTTCT
(3338 bp)

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