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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25626_c0_seq4
Scaffold_id
NCBI non-redundant
(nr)		DEAD_box_RNA_helicase_[Danaus_plexippus]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0007420 P brain development
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0010501 P RNA secondary structure unwinding
GO:0015030 C Cajal body
GO:0016607 C nuclear speck
GO:0016787 F hydrolase activity
GO:0031017 P exocrine pancreas development
GO:0048546 P digestive tract morphogenesis
GO:0072576 P liver morphogenesis
Transcript
Level		FPKM:3.07 TPM:2.84
ORF Entry
Sequence
(Nucleotide)
GGCCAGCTCTAGCTTGCCGTCTGTCGCGCTAGCAGCAGCCGCGGCGGGACCGGACACGGC
CACGCCCGGTTTAATTTCCTTGACAATCTTCTTCGCAGCGAGCATCGTCTCGATTTGTTG
ATCGAGATCTCCCTCCACGTCCTCGTCGTCGGAGTCCTGCAGGCCGAGAGCCGCCTTCTG
GTACTTCTTCTTTTCCGAAGCAGCCTGGGCTTCAGATTCGTCAAACTTGAAACCTTTCCC
ACTAAATCCGCCTCCCGTGTGCACCTTCTTCCCGTCCTTCTCCTGCGCCTCCTTGTACTT
CTCCCACAGGTTCTTTAGTTCGGCGGGAGGACTGACTCCGGCCAGCTCGAAGGCCCTGAG
CACGTCGCCCGCGTACCGACCCTGCTCCGGAGTGAGGAAGGTCCAGGCAAACCCTTTGTT
GCCGGCGCGTCCGGTGCGTCCACATCTATGCACATAATCTTCATAGTGATTGGGGCAGTC
GTAGTTGACCACCAGAACTAGTTGCTTGACGTCCAGCCCTCGGGCAGCAACGCTGGTCGC
TACCAGCAACTTGACCTTGCCGTTCTTGAAGTCGACTATCGTCGAGTCCCTGTCGAATTG
ATCAATCCCTCCGTGTAAGCTCATGCAAGAATACGAGGCCTTCATGAGGTCTTTTAACAG
ACTGTCGGCGTTCTCCTGTTTGTCCACAAAGACAATGATGCTTCCCATTTGACTGTAGAG
TCCGAGGAGTTCCAGCAGTTTGAAGAATTTAGCTTCTTCCTCTAGTATAGCGACGTGCTG
TTCCACATCCTTGCAGACCACACTTCTTCCACCAACCTGTATTTCGATTGGCTTCTGCAA
TATCCTACGAGCGAGAGCCTCCATCTGTCTCGGGAAGGTTGCGCTGAACATCACGGTCTG
CCTGTCGGGTCTTATGTTGTCTATAATTTTCATTACCTGTGGTTCGAATCCCATGTCAAA
CATTCTGTCGGCCTCGTCGAGCACGACGTACGTGACGCGGCGCAGGTTGGTGACGCGCCC
GGAGTTGGCGGCCAACATGTCGATCATGCGTCCCGGGGTGCACACTATCATTTCGGCACC
ACGCTTCAGTTCGGCTATCTGTTCCGATATCCCGGTGCCCCCATAAACGCAAACCACACG
TAATCCGAGTGACTTTGCAAACTTCTTTATATCTTTGCCGATCTGCATGCAGAGTTCCCT
TGTAGGAGTCATTATGAGGGCTATTGGTCCGTCTGTATCTTCTAACGCCGGTTGGTCCAA
GACGTGCCTGAACATTGGCAGGATGAACGCTAATGTTTTGCCTGAACCAGTCTTCGCAAT
TCCTATTAGATCTCTTCCAGACATAATAGCAGGAATCGCTTGTGCTTGTATGGGGGTGGG
CTTTTCAAAATTCAACTTCTTTAGAATGTCAAGTTCTTTTTTACTGATACCGCAATGCGC
CCATGTCCTGATCGGTTTCGGACAGCCTTTTCCCTTGACACGGATACCTTCCAACTCAGT
CCTGTATGTTTCTACTTCCTCTGGTGTCATTCTTGCTAGTTCATTCACTTCTGTGTAAAA
TGACTTCCTAAATTGCATGTAGTCTAAACTAGCATGATCTACTTTGATCAAGTCTTTCCT
CTGTTTGGAAGCAAGATTAGCAGCGGCATCTTTTATGTCTTCTGTTTCTTCTTCAGATGA
ATACTCCAAGCCATCTTGATTTTGTTCTATCAGTTCACCCTTATTTTTCTGCTCAGTGAC
CTTTTTTTTGGCAGTGCCAGTAAGAATTACAATGCCAGTGCCACCTGTTGTTGGAACACT
AATAATTCCTTTGGCTTGGTCCATTTGATTGACTTTACGCACTTCTTGTTGCACTTCTTG
CATGTATGCATCCAAAGGATCAATTTCATCTTCTTCTTCTTTCTTTTCTCCTATATTGTT
TTTTTCTTTTCCTTCCGCATCTTCACCTTCATCACCAGAATCATCTTCAAGTGACCATTT
CTTTGATGTCGGTATTTGTATATTAGTAACAATGCTTCCTTTTTGAACTTCTTTTTTAGC
GGATTCAATTTCTTTACGTTTACGTTCAGCCCTCCATCTCTCTATACGTTCACGACGTTT
TTGCATTTCAGCTTCCAAGCGGTTTTGCTCTTCTTCCTTGTCAACAGAGCCCGGGTTATA
TTCAGAAGAATCAGCTTTGCTACTCTTTTCCTTTGATTTTGATCTCTCCCTTTCCTTCTC
CGGTGACTTCTTTCTCGATGATTTACTAGATCCATTTCTTTTATCATCTCTTTTATCACT
TTTTCTGTCCCGATCTCGCTCACGACTACGATCTCTTTCCCTACTGCGATCCCGTTCTCG
ACTTCGGTCTCTTTTAGAGTCACGATCTCTGCTACGACTGCGCTTCCTCTTTGAAGATTT
CGAGCCCCGATCACGACTTCTTGATCTTGACCTCCTTCGTTTACGATCCGGTGTGTCAGA
ACGACTTCGAGATCTACGTCGATCCCTTTCCCTATCACGGTCTCTCCCACTCCTAACCAT
TTTTTAAAGCAAATATAAA
(2539 bp)

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