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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25626_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		DEAD_box_RNA_helicase_[Danaus_plexippus]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0007420 P brain development
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0010501 P RNA secondary structure unwinding
GO:0015030 C Cajal body
GO:0016607 C nuclear speck
GO:0016787 F hydrolase activity
GO:0031017 P exocrine pancreas development
GO:0048546 P digestive tract morphogenesis
GO:0072576 P liver morphogenesis
Transcript
Level		FPKM:2.72 TPM:2.52
ORF Entry
Sequence
(Nucleotide)
GCGAGGTTGATGCGGGACGCGAGCCGCCGCGCTAACTCCAGCTTTCCGTCCGTCGCGCTA
GCAGCAGCCGCGGCGGGACCGGACACGGCCACGCCCGGTTTAATTTCCTTGACAATCTTC
TTCGCAGCGAGCATCGTCTCGATTTGTTGATCGAGATCTCCCTCCACGTCCTCGTCGTCG
GAGTCCTGCAGGCCGAGAGCCGCCTTCTGGTACTTCTTCTTTTCCGAAGCAGCCTGGGCT
TCAGATTCGTCAAACTTGAAACCTTTCCCACTAAATCCGCCTCCCGTGTGCACCTTCTTC
CCGTCCTTCTCCTGCGCCTCCTTGTACTTCTCCCACAGGTTCTTTAGTTCGGCGGGAGGA
CTGACTCCGGCCAGCTCGAAGGCCCTGAGCACGTCGCCCGCGTACCGACCCTGCTCCGGA
GTGAGGAAGGTCCAGGCAAACCCTTTGTTGCCGGCGCGTCCGGTGCGTCCACATCTATGC
ACATAATCTTCATAGTGATTGGGGCAGTCGTAGTTGACCACCAGAACTAGTTGCTTGACG
TCCAGCCCTCGGGCAGCAACGCTGGTCGCTACCAGCAACTTGACCTTGCCGTTCTTGAAG
TCGACTATCGTCGAGTCCCTGTCGAATTGATCAATCCCTCCGTGTAAGCTCATGCAAGAA
TACGAGGCCTTCATGAGGTCTTTTAACAGACTGTCGGCGTTCTCCTGTTTGTCCACAAAG
ACAATGATGCTTCCCATTTGACTGTAGAGTCCGAGGAGTTCCAGCAGTTTGAAGAATTTA
GCTTCTTCCTCTAGTATAGCGACGTGCTGTTCCACATCCTTGCAGACCACACTTCTTCCA
CCAACCTGTATTTCGATTGGCTTCTGCAATATCCTACGAGCGAGAGCCTCCATCTGTCTC
GGGAAGGTTGCGCTGAACATCACGGTCTGCCTGTCGGGTCTTATGTTGTCTATAATTTTC
ATTACCTGTGGTTCGAATCCCATGTCAAACATTCTGTCGGCCTCGTCGAGCACGACGTAC
GTGACGCGGCGCAGGTTGGTGACGCGCCCGGAGTTGGCGGCCAACATGTCGATCATGCGT
CCCGGGGTGCACACTATCATTTCGGCACCACGCTTCAGTTCGGCTATCTGTTCCGATATC
CCGGTGCCCCCATAAACGCAAACCACACGTAATCCGAGTGACTTTGCAAACTTCTTTATA
TCTTTGCCGATCTGCATGCAGAGTTCCCTTGTAGGAGTCATTATGAGGGCTATTGGTCCG
TCTGTATCTTCTAACGCCGGTTGGTCCAAGACGTGCCTGAACATTGGCAGGATGAACGCT
AATGTTTTGCCTGAACCAGTCTTCGCAATTCCTATTAGATCTCTTCCAGACATAATAGCA
GGAATCGCTTGTGCTTGTATGGGGGTGGGCTTTTCAAAATTCAACTTCTTTAGAATGTCA
AGTTCTTTTTTACTGATACCGCAATGCGCCCATGTCCTGATCGGTTTCGGACAGCCTTTT
CCCTTGACACGGATACCTTCCAACTCAGTCCTGTATGTTTCTACTTCCTCTGGTGTCATT
CTTGCTAGTTCATTCACTTCTGTGTAAAATGACTTCCTAAATTGCATGTAGTCTAAACTA
GCATGATCTACTTTGATCAAGTCTTTCCTCTGTTTGGAAGCAAGATTAGCAGCGGCATCT
TTTATGTCTTCTGTTTCTTCTTCAGATGAATACTCCAAGCCATCTTGATTTTGTTCTATC
AGTTCACCCTTATTTTTCTGCTCAGTGACCTTTTTTTTGGCAGTGCCAGTAAGAATTACA
ATGCCAGTGCCACCTGTTGTTGGAACACTAATAATTCCTTTGGCTTGGTCCATTTGATTG
ACTTTACGCACTTCTTGTTGCACTTCTTGCATGTATGCATCCAAAGGATCAATTTCATCT
TCTTCTTCTTTCTTTTCTCCTATATTGTTTTTTTCTTTTCCTTCCGCATCTTCACCTTCA
TCACCAGAATCATCTTCAAGTGACCATTTCTTTGATGTCGGTATTTGTATATTAGTAACA
ATGCTTCCTTTTTGAACTTCTTTTTTAGCGGATTCAATTTCTTTACGTTTACGTTCAGCC
CTCCATCTCTCTATACGTTCACGACGTTTTTGCATTTCAGCTTCCAAGCGGTTTTGCTCT
TCTTCCTTGTCAACAGAGCCCGGGTTATATTCAGAAGAATCAGCTTTGCTACTCTTTTCC
TTTGATTTTGATCTCTCCCTTTCCTTCTCCGGTGACTTCTTTCTCGATGATTTACTAGAT
CCATTTCTTTTATCATCTCTTTTATCACTTTTTCTGTCCCGATCTCGCTCACGACTACGA
TCTCTTTCCCTACTGCGATCCCGTTCTCGACTTCGGTCTCTTTTAGAGTCACGATCTCTG
CTACGACTGCGCTTCCTCTTTGAAGATTTCGAGCCCCGATCACGACTTCTTGATCTTGAC
CTCCTTCGTTTACGATCCGGTGTGTCAGAACGACTTCGAGATCTACGTCGATCCCTTTCC
CTATCACGGTCTCTCCCACTCCTAACCATTTTTTAAAGCAAATATAAA
(2568 bp)

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