SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25621_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_pyruvate_carboxylase,_mitochondrial_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0004075 F biotin carboxylase activity
GO:0004736 F pyruvate carboxylase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005829 C cytosol
GO:0006090 P pyruvate metabolic process
GO:0006094 P gluconeogenesis
GO:0006107 P oxaloacetate metabolic process
GO:0006629 P lipid metabolic process
GO:0006768 P biotin metabolic process
GO:0008152 P metabolic process
GO:0009374 F biotin binding
GO:0010629 P negative regulation of gene expression
GO:0016874 F ligase activity
GO:0019074 P viral RNA genome packaging
GO:0031406 F carboxylic acid binding
GO:0044791 P obsolete positive regulation by host of viral release from host cell
GO:0044794 P positive regulation by host of viral process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:53.84 TPM:49.85
ORF Entry
Sequence
(Nucleotide)
GTGCCGGCAGCCGTGTCGTGTGGACGTGTGAATAGCCTTCTATTATTTTTATCGTTTCCT
CGTATTCAATAAATATAAAAAGATTTAGAGCCGAGACGCCGAAGTACGACACAAAAAAAC
GAAACATAACAAAAAATATCGAAAGAATATAATATATCTACGTCTAGTCAAAGCATTCAC
AATATAATTGAAATCTTGTAAACAAAAAAAACAAAAAAAACGTAACGAATCACTAAAATG
AAATAAACTGTGTTATTAGGATATTAAATAGAATTATTAAGTTTGTACTTATTTAGTTTA
TCAATTAATAAGTTCACTAGTATAAATAAAGATGCAAATACTAAAGGCAAGATTCGCTTT
ACGCGCCACAGCGTCGCAATTCCAGGCGTGGAGCTCGGCCAAAACTCGGACAGCTGCTAC
GGACTCGAAGATAGTGGAATACAAACCAATCAGAAGCGTTCTTGTTGCGAATCGCGGCGA
GATCGCCATACGTGTCTTCCGAGCATGCACGGAACTAGGCATCCGTTCTGTGGCTATTTA
CAGCGAACAAGACAAACTGCAAATGCACAGACAAAAAGCCGACGAATCGTATATAGTCGG
AAAAGGTCTGCCACCAGTCGAGGCCTACCTCAGCATCCCGGAGATCATCAGGGTTGCGAA
GGAGAACGACGTTGACGCCGTACATCCCGGCTACGGTCTTTTATCTGAAAGGGCCGATTT
CGCCCAGGCCATCATTAATGCCGGTCTGCGGTTCATCGGGCCCTCGCCGAAGGTCGTGCA
GCAGATGGGAGACAAAGTAGCCGCCAGAAAAGCTGCTATCGAAGCAAAGGTGCCCATTGT
TCCCGGAACTGATGGTCCGGTCACAACGAAAGAGGAGGCTGTGGAGTTCTGCAAAAGTCA
CGGTCTTCCGGTTATCTTGAAGGCTGCGTACGGAGGCGGCGGTCGTGGTATGAGGGTGGT
CCGTAAGATGGAAGAAGTGCCTTCGGCTTTCGAACGAGCTTCTTCAGAAGCTCTCGGCGC
TTTCGGCAACGGTTCTATGTTTATCGAACGATTCATCGAGCGACCCCGGCACATCGAAGT
ACAATTGTTGGGCGACAAAGCCGGCAACGTTGTGCATTTATACGAACGGGATTGTTCGGT
ACAGAGGAGACATCAGAAAGTCGTCGAAATTGCTCCTGCACCGAAACTGGACCCTAAGAT
TCGTCAGAAAATGGTCGAGTGCGCCACACATCTGGCGCGGCACGTCGGCTACGAGAACGC
CGGCACGGTCGAGTTCCTGCTCGACGACAAAGGGAACTTCTACTTCATCGAGGTCAACGC
CAGATTGCAAGTAGAGCATACCATAACAGAAGAAGTCACAGGTATCGACCTAGTACAGTC
ACAGATACGTATCGCCGAGGGGATGACCCTGCCCGAACTAGGGTTGACGCAGGATAAAAT
ACAAGCACAGGGATACGCGATACAATGTCGTGTTACTACCGAAGATCCGGCTAATAACTT
CCAGCCCAGTACGGGCAGGATCGAGGTGTTCAGATCCGGTGAAGGGATGGGAATCCGTCT
CGACTCAGCCTCCACGTACGCCGGCGCCGTCATCTCGCCGTACTACGACTCTTTACTTGT
CAAAGTGATCTCTCACGCTCACGACCTACCCTCGTCGGCGGCCAAAATGAACAGAGCCCT
CCGCGAGTTCCGCATCCGAGGAGTCAAGACCAACATCCCCTTCTTACTCAACGTGCTCGA
GAACCAGAAATTCCTAAACGGTTCGGTCGATACGTACTTCATAGACGAAAATCCGCAACT
GTTCATGTTTAAAGCCTCACAGAACAGAGCGCAGAAGATCCTCAACTACCTCGGCTACGT
GCTGGTCAACGGGCCGGCCACTCCTCTTGCCACCAAAATACCCCCATCTGACGTCAAGCC
CTACATACCTCAAGTGCCGCTGGACCTTTCCCCAGAGGCTATTAAAAGACAGGAATTAAC
CGGAGAAAACACAGCCGTCCAACCGCCGAAGGGCTACAAACAAATACTCGACGAGGGTGG
CCCCGAGGCCTTCGCCAAAGCGGTCCGACAGCATAAGGGTCTGCTCCTGATGGACACGAC
GTTCCGGGACGCGCACCAGTCGCTGCTGGCTACCAGGGTGCGGACCCACGACTTGCTCGC
CGTCTCGCCCTACGTAGCGCACAACTTCAACAACCTGTACTCGCTCGAGAACTGGGGAGG
AGCTACATTCGACGTGGCCCTGAGATTCCTCCACGAGTGTCCGTGGGAGCGTCTCCACGA
CATGAGGCAGCTGATCCCGAACATTCCGTTCCAGATGTTGCTCCGCGGCGCGAACGCGGT
CGGCTACACCAACTATCCCGACAACGTCGTCTTCAAGTTCTGCGACATGGCCGTCCAAGC
AGGAATGGACATCTTCCGAGTTTTCGATTCGCTGAACTACCTGCCGAACTTGGTGCTGGG
CATGGAGGCGGCCGCGAAGGCAGGCGGAGTCGTCGAGGCCGCCATCTCGTATACGGGCGA
CGTTTCGGACCCCAGCAAAACTAAATACGACCTGAAGTATTACACGAAGCTGGCCGACGA
TCTGGTGAAGGCCGGTACTCACGTGCTCGCTATCAAAGACATGGCCGGACTGCTGAAGCC
CCAGGCTGCGAAGTTGCTGATAGGCGCCATCCGCGCGGCGCACCCGCACGTCCCGCTGCA
CGTGCACACGCACGACACGAGCGGCGCGGGCGTGGCCGCCATGCTGGCG
(2749 bp)

- SilkBase 1999-2023 -