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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25564_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_GATA-binding_factor_C-like_isoform_X3_[Bombyx_mori]
Ontology
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001085 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007507 P heart development
GO:0008045 P motor neuron axon guidance
GO:0008270 F zinc ion binding
GO:0009887 P animal organ morphogenesis
GO:0009888 P tissue development
GO:0043565 F sequence-specific DNA binding
GO:0045165 P cell fate commitment
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048565 P digestive tract development
GO:0048646 P anatomical structure formation involved in morphogenesis
Transcript
Level		FPKM:7.20 TPM:6.67
ORF Entry
Sequence
(Nucleotide)
GATCGGCATCAAAAAGAAAATTTCAAATCAATATTGATAATTTATTCACAACTTCATTTA
AAATACACAACTTCACAATGTTTTGTTTTATAAACTAAAAACTTTAGGTAAGGGATATCG
TAAAGGCTGTTTGTGGCGATTTCTAATGTACACGTCTTTTTAATTATTTTAATAAACATT
TTACTTTATTTGTCTACTGTTTAATTTACATTTTCATATTTACATTTTTTGGGGTTCAAA
TGCCTTGTTTATCAAAATCACAATGAAGTATATCGCGAATATTTTTTTAAAGAATTTATT
CATTAATTTTTCAATAATATTTTTGTAGTTGCAAATGGAAAATAAATTAAACAAAATTCA
TTATATTTTGATAAAAATGACACCTCTTAATGTATGGCCACTCGATATCTTAAAATTTTA
CAACGGCATAGATAGTTGTTATACATATGTTTGTTTCATACAATTCTTTTCTCAAATCAA
CATATTAATATTATACAAAATAAAGTGTACAATTATAGTCACCGGCTTCTCTTGAAATCG
TTCAAAATTAATTCTCAATTCAAAACTGTAAATATTTACAAATACAACGTTTTATTATCT
ATTACATAAATTACTATTGCATTCGTTCGATAACATTTACAGAAATAAATTTACAAAAAA
AGACAATCTTTTCTCGTATTCTCTGAACACATCGCAACGTTTACAGCGATACAATTCGAC
AAAATTAAATAATATTTAATAAAAAATAATAATTAAACGCAATTTACAAAGGAACAGAAT
TTGTAACTTAATTTATTTACAAAATACACAAATAATGTTTTTGAACTATACTTATTACCT
TATCGTATAAGCCGACTTCGTGACCGACCTTAGCTAATATATAATACTGTACAATTTCGC
TAGTATAGTTACTTCATGTAAAATCGTTCTTAATTTATCAAATGTTAGTTCACATCTCTC
ATATAAAGTGAAAACTAATTGAAAAATGTTCGCCATCTTTTCGATACTTTAATTTTACCT
GTATACGTTCTAGAAAAATTATAAAATTAATTGTTCATTGCTATCTCTTTCTCACTGTTC
CCATTTATGTTTATAGCATCTCCGATTTTAGCCAACACATATGTTAAAATAGGTCTGACG
ATTTATTGAAAATGTTCTTTTTCCTTTTCCACTAATTTGATAAACTAATAAAGAGTCTTT
CTTCCTAATCTACTGATCGATCAATATTTTCTAAAAACAATTCCGTAAATAGCATTACTT
ACTGTGATGTAATTGTTCTATTTTATACGACAGATGTGAACTGATTAATAATACTTGAAG
GAAACTGAACGCGGAATAATAAAGTCTCATTTGGGGTTTACAATGGGACATAAGTATTCA
GAATCAGATATGTTCAAACAATTCTGCATATTATTTTATTATTTTTTGTAAAATTTTACA
AACGTCAATTCAGTTTGCAGTCTCATTAAAATGTGATGTTTTAAAATAAATCTTATCCTT
TTATAGATTAGTCTGTAAATCGTTTGAAATCACAGCGTCTGTTTCTAAGGTTTCCTCGGA
TTTCTTCATGGGGCATGTTTTCATCCCATCATGTGATCATCCCATGTGACTAGGACGGCT
AAGACGTGTAAATTATCACGAGAGATACAAATATTCTTATCCGATTACTAGGTCCTCAAG
TTGGCTGACTTATCACGTGTATTCACTCCTCCAACCCGTCATAGAATTGAGCTGCGCAAG
GTGATGGTGATGGTAAGGGTTGTGGGAGGTCGGTGGTGGGGCGAAACCCTGATGGGGCGC
TCCGTACCAGTGGGACATGTGCGCGGCCGCCGGGTGGACTAAGCCCACTTGGTGCTGACC
GAAATCCATAGCTGACGGGAAGGCTGAGCCTCCGAATCCTTTGGTAGCGTCTCCGAGAGG
CTTGATCATGTCTCCCATGACTCCGCCGAGCGCTAAAGCACAAGCTCCCCCACCGCCCAT
TCCCATTCCTCCCTTCTTCTTCTTACTTTTACTGCTTAACTTCCTATTTCTTGTCTGGAT
ACCTTCCTTCTTCATCGTCAAAGGTCGGTTTACGTTGTGTAGCTTGTAGTAGAGTCCGCA
AGCGTTGCATACAGGTTCTCCGTTCTGGTTTCTCCTCCATAATGTCGTTGTGGTCGTCTT
ACAGTTCGCACACGAGGTTCCCGCCCGTCGGGCCGCACTTTGTAACGACAATCTTCGTTT
AGGCTTGATCAATGGTCGGTTTTGTCCGTTCATCTTGTAGTAGAGACCGCAGGCGTTGCA
GAGGTAGTGTCCGGTGCCGTCTCGTCGCCACAGCGGAGTGCTCGTCGCCCCACAATTGAC
GCACTCTCGACCCTCGGCGCTAGTTCGCGTCTTGTTCGGTCGCGGCTTGTTCTGCTGCTG
CGCTCCGCTATAACCTTTCCCCTGATAGTTGTAGTAGTCGCCGCCGGCGGCATTGTACTG
AGCGTTGTATTCCCCGGAGGGTTGACTCGTGTCCTGGGCGCAAGAGTCCGGTTGCGCACC
TTCGCGCTGCTTGGAAGGCGGCGCGCCCATCATTGGTTTGACGTCTCCGCAGAGGGGCAG
CTCTTGTTGTTGCTGCATGAAGGCGACGCTCATCGCTGTAGCATGCGCTACCGCGGCCTG
GTAGTCCTGTTGACCGAGAGCCGCCGCAGCCACAGAGTCTGGCGTCGAGTCTTTCGGAGG
AGTCGGAGGAAATGAAAACAAAGGATGGGGATGAGGGTGTTGTGCTGGTGACAGCGGTTT
GTCGCCCGAGGAACCATCTTGTTGGAAGCCCCCTCCCCACGCCCCGCTCCCCAGCGCCTT
AGACTCGAGCCAGGGATGCAGCGGCGTATGGAAGTGAGGCCGACACACCTGCCCACTGCT
ACCGCTAAGCGTTCGACCATGCGAACCGACAGCGGCCGAGTAGGGGGCGTGCATCTGTTG
ATGGTAGTAGCGGGCGCGGCTATGGTGGCCCCCTTCGAGCGGAGAATGGAAGAAGCCGTC
TCCATTGGTCTCCGCGTTGACGTCGCCGGCGGCCGGGCTGCCGTTAAGGCGGCTCTCGTA
CCACCGCTGCTGCAGCGCGCTCGCCCCCGCGCCGCCGCCCTCTCCGCTCATGTCCATGAC
CGCGGCACCGATCTCACACACCATGCATCGCTTTTATACACACGCACTGTAAGTCCACTC
TCCTATCCGCATCTCCAGCAGTCAATAGTTCAGTCCGGGTTCGCTCAATCACTAGACGAA
AGCGATCGAGCTCAGTCTTGGCATATTGCACGGATTTACTTTCAAACCAGCCTCACATTG
CTTTTGTACTACGAAGCGAGTTCATATTGTTCGTACCAGACGATAATAATACGAAATCTC
TTGCGTGATGATCTCGTGATAATATAGTGATGAAACCAGTACAGTCTCTGTGATCTATCA
CAACCGACGACACCGCTATCTGGCAATCGACTTGATTGTCCTCGAAATCTG
(3471 bp)

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