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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25561_c0_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_paxillin_isoform_X2_[Bombyx_mori]
Ontology
GO:0001725 C stress fiber
GO:0005515 F protein binding
GO:0005623 C obsolete cell
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0008270 F zinc ion binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0035994 P response to muscle stretch
GO:0046872 F metal ion binding
Transcript
Level		FPKM:7.58 TPM:7.02
ORF Entry
Sequence
(Nucleotide)
GCCGATAGCACACAGTTCCGTCGCGTCCTTGACACATTCAACCCAAGTTTGTAAACAAGT
GCATAAGAGCAATTAATTGACTTGTAAATAAATATTTATGGATACACTATGTTGATGTAG
TACTAGAAACGCTCGATTTAAATGGCGTAGGCAGTGATTATGGACTGTTAACACGGTGTC
GGTATCGTGGGTGTCAATAACTAAGAGAACAGCTTTCCGATTGGTCGAAGATGGATAGGA
CAATGTATGGCAAAGTGCTACCAGGCACTTACTATCCATTCCGCTGCGCTATGAAGGAGA
ACGGAATATCGCCTGGCTATGCTTTGCTTGCCGACCTCCAGAACTCTATCAACCCTGGCG
GCGCCCGAGTCAGCAGCCCCAGCGGCAGGACCACGTCGCCCGGTGGTCGCACCAGTTCCC
CGGGCAGAACTGGGTCTCCTCTAGGCAGGGGCACTTCACCGGGCCGTCTCAGCTCGTCAG
GCAGCCTGAGTTCCCCGACCTCCACCGGCTACGGATCCATCAATGGATCTAGGAATATTA
GCTCGGATTATGCAAAACCTGCTTCGCCAACTTACCAAAACACAAGCTCATTCCACTCAG
AGAAGATGACTCCGCATAAATATACGACTACCGTCCAAAGCAACTACAGTGCCCACACGC
CCGGTTACAACGTGGGACAATCGCCAGGCTACGGCAGGACCGGTGGTCGAGGGAACCTGA
GCGAGCTGGACACCCTACTCGACGACTTGAGCAGTGCCCGCTACGGGAATTACGCAGAAA
AAACTTCTTTCACCGAAAGATCTGTAAATGACAGCTACGGGCGCAGTAACGGAGCCATCA
GTCCGGCGTCAGCGAGGCCCACCGTCGACTCCTTGCTGGATCAATTAAGCGCGGAAATAC
CTAATGGCCGCCAATCCACATCACCAATACCACCGCCATCGACGGGAGGAACTCTCCCGA
GACCGGGCACCAAACAGGTGACCGTCACCGTGCAGGAGACGGTCGTGGAACCGGCTCAGG
CTCAGCAACAGATTCCGGTGGCGGCCCCCGTAGTCCGGCACCAGCACCACGCGTCCAGCG
CCACCAAGGAACTTGATGACTTGATGGCGTCGCTCTCCGACTTCAAGGTTAGCGGCACCG
GGGGAGAAAGCGGTACTCACGTGTACAGAGAGAAACGCGCGTGGCAGGAACAGTACCGCA
CCAACCCGCGTCAACCCGAGTCCGCATCTCTCGAGCATATGCTCGGATCTCTTCGAGCAG
ACATGAGCCGCCAAGGAGTACAAACCCCCCAGAAGGGATGCTGTAACGCCTGCGAGAAAC
CAATCGTTGGACAGGTGATCACGGCGCTGGGTCGCACCTGGCACCCTGAGCACTTCACCT
GCGCTCACTGCAACCAGGAACTGGGCACGAGGAACTTCTTCGAGCGCGACGGCAGGCCCT
ACTGCGAGCCCGACTACCACAATCTGTTCTCACCGAGATGCGCTTACTGCAACGGACCAA
TCTTGGATAAATGCGTCACAGCTCTAGAGAAAACGTGGCACACGGAGCACTTCTTTTGCG
CTCAATGCGGTCAGCAATTTGGGGAAGAGGGTTTCCATGAAAGGGACGGGAAGCCCTACT
GCAGGGCTGATTACTTTGACATGTTCGCCCCCAAATGCGGTGGTTGCAATAAGCCCATAA
TGGAAAACTATATCTCAGCGCTCAACACCCAGTGGCATCCAGACTGTTTCGTTTGCAAGG
ACTGCCAGAATCCCGTCAAAGGGAAGTCCTTCTATGCCATGGAAGGGAAGCCGGTATGCC
CAACATGCGTTGGAGTCGATGATGATGAATAAGGAATGCCTTCGAATGACCTCCCCACTC
AGAACGAATGCCCTCCCCAATTTTTTTACAGCTATGCTCCAATATATCTAAAGGAATGCA
AACATATACACGTACATAAACACAGATGATACTCGCACACAACACGACACAACGTACACA
TAGTAATAGCATAGGGAGTTTTTTTTAATGTAATATACATAAATATATATATTTTTGTAA
TTTATTGTAATGTAAGATTTATAAATAAAGAGAACCAAAAAAAAAATTAGAAATAAAACA
AAAATATTAAAATAAAAGCGGAA
(2123 bp)

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