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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25558_c6_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_zinc_finger_protein_on_ecdysone_puffs_isoform_X2_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003727 F single-stranded RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005875 C microtubule associated complex
GO:0019233 P sensory perception of pain
GO:0046872 F metal ion binding
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:0.00 TPM:0.00
ORF Entry
Sequence
(Nucleotide)
ATAATGCATTTGCTATTGCATTTTTTTATTATAATATATTGGTTGTCTGTTTTCATAGAT
ACAATTAATACTACTTATACAGGTTTGTTTGCATGTTTATTATTGTCAATACATTATTTA
TGATACATCAAATACTTTATACAGTCTACTTGAAATGTCTGAAACGATATGATGACAATA
ATTTTGTGATTTCACTCTGATATCCTGACCGGTATCAACAGGAGACAATATAAACGAAAT
ACCACTGATATTTTCCGTAGTAGAAAACCGTATGTGACTTGTTTATGAAATTCTAGCAAA
AAATTCAAAAAAACTTTTTGGAAGTAATATTCCTAAGTTTGAAATTGATTGTTAGTTCGA
CTCCCTAATGTATGTGTTTATTCGTTCGCGATTCCACATATTTTTTTAATAAAAAAGCAA
CATCATTAATTTATTGTAGTTCGTAAAGCACTTTGTTACGTTTTTCTTTTTTTCATTTTA
CAAAATATGAAATCGTAGCACATATAAATTAGCGTGGACAGAAAAGGGTAATTTAACAAA
ATATAAAACTTTTATGTTTGAGCTAACAATCTTCAAAAGGCTTCAAAGGCAAATACATAC
AATAAGAGAAGAAAAACAAACACTAAATTATGGACATGGCAAACTGAAATTATAATTGAA
AGATTAGGACACATTAAAAAATCCGTATCGCACTTCACAGTACAGTAATCAGTGGTTTAA
AAACTAGCAACTTTTTTACGCAGCAAAACCTACAAGATTTTGTATCACATTCAATTCTAA
ATGGTAATAATTGACATGAAGATACTAAAATGTTACCGTAGATTGGGGGAATCGGGACTC
TTTCCAAATCCAACTCAAATTTTCAATGGTTTTTCTTAAACTAATAAAATTGAGATTAAA
ATAGTTCCGGAAGTTTAAATTTTCATATACAATGCATTATTATATATAGTTCATTGCAAA
ATATACACAAAAATAAAATAAAACTATTGGGCCACATATGGAGACAATAGCTTTTCGATA
GGGCTGGTGAGTACTGGCACTGTTTAGTTGTTTAGGTAGGTACAAACTATTTATCTGAAT
AGATCCAAACTTCGCTTGACAGAAATTTCAAATAGTAACAAAGATAATTAAATCGTTTTT
AATACATTTTGTAGCTTTCCAATCCTATTGACAAATGATCGTTTTTTCTTAAATTGATAG
TGACAAGATGTCTGAGTTTTGCTAGATTATAGAAAAAATATTGCCTTCAATTTAAAATTG
GACCATTCAGTTCACCACAAAATTAATGCCCACTATGCCTGTAAAGAAAATCTCAGATTT
GTCTTTATTCTACCCAGAGTCCTTATTCCCTCCAATCTATGGTACTCTTACTTGAAATTT
TATTGATATTTTCAAGCTGTTTTAGATGGTTCACTATCATTTTAGTTGGTGTAATATGCT
TAAACAACTTCTAATATAATTTTATGTTATAAATATCAATTGACTGAGATCTAACATTCT
CAATTCAATCCAAGTGATAAAACGCTAAAAATAAGTAAGTAAAAAAATGATTTTATCTAA
TTACTAATGGAGTAACTTGGATTAATATTATGTAACATAATAACGGAGATAAAATTGATT
TAATTTTACTTGACAGTGGCTGTTTCTTTGTTGGTCGAATTTTAAAGTAAGTAACTTAAA
ACAAAGAGTAAAAGTAAAAATCAATTTGATTTCCATTATTACATGCAAAGATACTGAAAT
TATAATTATTTAAATATTGAGAATTTTCATACTTAAATAACACATGCAAGGAATACATTA
TGTCCTGTAACTTACAGCTGTCTTTTTAAGTTAAATCTTTTGAAACTCTCATTCCATTTA
GTTTAGTAAACTTAAATATTTTAGGAGACAAACAGAAACCTTCACATCACAATATAAATA
TTTTGTGTATGTTATTAGATTAGATAGTTGGTGAAACTTCATGAGCGAAAATTTTACCAC
AATACAGTAATGTAAATAAAATGTAATCAAAATAAGAATAGGATTTGCTGATGGAACACA
ATTTGAAAGAGATTTTTTTGTGGATTTCCATAATTCATCAACATAGGATTTCATTTATAG
ATTATTTACAGATATTATTTTGGATAATTAATTTGGTAGAAAGTCAATCCTGTCCTTATT
TCGCTTGCATTGTAAATATTTTTATCCAAAGCAGTAATTTCGGTTGCTTGTAACTAGCAA
GTTCTGGGACAACATACACTTGTTCTAATATCTGCCACGGCCCCTGCCTCTACCGCGTGC
TCTAGCTCTCGGTGAGGGTTTCGGTTTCACATCTGGCACGGGTAGAGTTAATTGAGGACT
TTTTTCTTTTTCTGGGGGCTGTTCAATTACTTCCGCTACTTCAGGCTTCTCTTCTACTGG
ATCCTCGATTTCGGCTGTCGCTTCAGGTTCTATTTTAGGTTTTATATCTGGTTCACCAAG
TTCTTCTTGGGATTTCTTCTCATCTTCCAGTATTTCATCAACCGACTGCTCCCAATCTTC
AAGATCATCATTATTTGGAATACCGTCATCAAATTGTTCATCACGGTTTGTGTCTGTATA
TTCATTAGCATGTTCATTGTCATTGTCATTATCATTGTCGTTGTCATTATCATTTTCATA
ATCTTGTCCTTCATGATCGGAAGATGTCTTGCGTCTCTTCCAGTTACCAGATTGATCGTT
GCGTTCAGAAGGACGTTTCCCATTTGAATTCTCAGTGGATTGAGTTCCCGCTGGTTTGTG
TCCAGTCTTCTCAGAAAGCATCTTCAGGAAGAAAACGTGATGTCTCCAGGTTCTCAAGTG
CACATCAGCAGTTTCCTGCGAATCGAGGAGTTTCTTGCACAGCTTGCATTGTATGCAGCG
GAACTCAGTCAAGAACGATTGACCAACACCACGTTCCGTACTGTAACTTGGGAACATATC
CTGAGTGACATAGCTGAGATCATCATCTTCTTTGAAGTCCAGGATGACCTTTTCATCATC
AACAGGTTTACTATCAGCCTTCTCACTCACATCTTTCATCTCTTGATCTTCATTTTCAAT
CTTAGCTTTGTTTTCAGTGTCAGTTTGCTGTTCATCAGTTTTATCATTGTCATCATGCTT
CTCTTCTTGAACATCATCTCTGCGTGGTCTACGCTGACGACGCTCACACAGGTATGACTG
CTCCATGCCCAAAGTTGAAATCATCAACATTTCAGGCTTGGGCTTTGAAAGTACATCTTG
TTTATCCTGAATTGCACGCAAATGTTCAGCAGTGAGACGGTGTTCATCTAATTCAATTCT
AGTTGGCAACTCCTTGTGGCAAGTATTACAGAAGGGATGTAGGTATTTCTTAAGCTTCCG
GTGTCCAACGGTAGTCCGGTGAGCTGCTCCGTTGGCCGCATACATATCACACATAGCACA
GTAGAAGTCTCTAGCTGGTTGCTGACCAGATTTGCGGGTGCGTTTCATTTCACGAATCTT
ATATTCTTGTCTCATTGTATCAGCAGTAAGAGCATAGCTCTCAACAGTCTTCTGCATCAT
AATGGCATGAGCTCTTCCACTGAGATGATTCTCAAATGAACGTCCATCCCACATGCTCTT
GTGGCAGATGTGACATTTCAGCAGCTTTGAATTAATGTCATCATAGCGCGTTTTAGGGAC
ATCTTGCTTTTCATCCTCTTCTGGCTCTTTTCTCTCATTTTCAGGTTTGTCAGTCTCAGT
AGTCTTCTCTTCCTGTTCACTCTCCTTAACAGGCTTAGCTTTAGAATCGGTTTCCTTTTT
CGGGGAGTTCTTGTTATGCTGCCGTTGCCCTTCATTGGGCCTGAACGGTTTACGATTCAT
GTTGATACGCTCACCAGCGCGATTGTAATTTCCCGTACGCCGGAAATTACCATGATTGCC
CATCCTATTAGGTTCATACCCACGGTCAAACCGACCCATATTAGGCCCAAAGTCCCTCCT
AATGGGCATGTCTAGGAGCGATGGGACCGGGTTCTGCTTCGGTTGGAACAAATTAAGGAG
GTTACTGGCAAGAGCCAGCGTGGCCTCGGCGGAGCCTCCAGCCAGAGGGAAAAGGTTGGG
TAACCGCTCCCCCGGGCCTCCGGACTGCCACGGGGACACATTGTTACGTGGAAAGTTTTT
CCCACGGTCGTTTCTACCGAAGTCCGTACGGCGTCCCGGTTGTGGTCTGCGGTTCGCCAT
CTTTGTAATTTTACTGGAATCCGTTGGGGTTTTGATTGAAAATGACGCAAACAAGAATTT
ATATGAAATGAAATCACTGACCAGAGTTATTATATAGCAATTAAACACGAAATATTCCGA
ACAGTAACACGACGAAAGCAGGAATTACAAAAGCAAAATCAGCTAATGAATGTTGGTACA
AATCTCTACGCAATATGGCGAATGGCTACCGGTCGCGTCGGGCAGCAGTGCT
(4432 bp)

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