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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25558_c6_seq31
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_zinc_finger_protein_on_ecdysone_puffs_isoform_X2_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003727 F single-stranded RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005875 C microtubule associated complex
GO:0019233 P sensory perception of pain
GO:0046872 F metal ion binding
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:0.00 TPM:0.00
ORF Entry
Sequence
(Nucleotide)
AGGGGTCGATATAGACCACTTTGGAAATCACTGGTATAGTCGATAACTCTCCGTCAGTCA
TATTACCGCTGGTTGCCGAATACCCCGTTGAACCGGAAACAGTCTGCTGAGTCGGAAGCG
CGATACACCTGTATAGTATGGCTGTAAATCCCTACTCTTTGCCGTTGCAGTATGTAAGTG
TTGACACGACATCGATGTTACTCAACATGGCCGAATATGTCAACGTACCGTAGATTGGGG
GAATCGGGACTCTTTCCAAATCCAACTCAAATTTTCAATGGTTTTTCTTAAACTAATAAA
ATTGAGATTAAAATAGTTCCGGAAGTTTAAATTTTCATATACAATGCATTATTATATATA
GTTCATTGCAAAATATACACAAAAATAAAATAAAACTATTGGGCCACATATGGAGACAAT
AGCTTTTCGATAGGGCTGGTGAGTACTGGCACTGTTTAGTTGTTTAGGTAGGTACAAACT
ATTTATCTGAATAGATCCAAACTTCGCTTGACAGAAATTTCAAATAGTAACAAAGATAAT
TAAATCGTTTTTAATACATTTTGTAGCTTTCCAATCCTATTGACAAATGATCGTTTTTTC
TTAAATTGATAGTGACAAGATGTCTGAGTTTTGCTAGATTATAGAAAAAATATTGCCTTC
AATTTAAAATTGGACCATTCAGTTCACCACAAAATTAATGCCCACTATGCCTGTAAAGAA
AATCTCAGATTTGTCTTTATTCTACCCAGAGTCCTTATTCCCTCCAATCTATGGTACTCT
TACTTGAAATTTTATTGATATTTTCAAGCTGTTTTAGATGGTTCACTATCATTTTAGTTG
GTGTAATATGCTTAAACAACTTCTAATATAATTTTATGTTATAAATATCAATTGACTGAG
ATCTAACATTCTCAATTCAATCCAAGTGATAAAACGCTAAAAATAAGTAAGTAAAAAAAT
GATTTTATCTAATTACTAATGGAGTAACTTGGATTAATATTATGTAACATAATAACGGAG
ATAAAATTGATTTAATTTTACTTGACAGTGGCTGTTTCTTTGTTGGTCGAATTTTAAAGT
AAGTAACTTAAAACAAAGAGTAAAAGTAAAAATCAATTTGATTTCCATTATTACATGCAA
AGATACTGAAATTATAATTATTTAAATATTGAGAATTTTCATACTTAAATAACACATGCA
AGGAATACATTATGTCCTGTAACTTACAGCTGTCTTTTTAAGTTAAATCTTTTGAAACTC
TCATTCCATTTAGTTTAGTAAACTTAAATATTTTAGGAGACAAACAGAAACCTTCACATC
ACAATATAAATATTTTGTGTATGTTATTAGATTAGATAGTTGGTGAAACTTCATGAGCGA
AAATTTTACCACAATACAGTAATGTAAATAAAATGTAATCAAAATAAGAATAGGATTTGC
TGATGGAACACAATTTGAAAGAGATTTTTTTGTGGATTTCCATAATTCATCAACATAGGA
TTTCATTTATAGATTATTTACAGATATTATTTTGGATAATTAATTTGGTAGAAAGTCAAT
CCTGTCCTTATTTCGCTTGCATTGTAAATATTTTTATCCAAAGCAGTAATTTCGGTTGCT
TGTAACTAGCAAGTTCTGGGACAACATACACTTGTTCTAATATCTGCCACGGCCCCTGCC
TCTACCGCGTGCTCTAGCTCTCGGTGAGGGTTTCGGTTTCACATCTGGCACGGGTAGAGT
TAATTGAGGACTTTTTTCTTTTTCTGGGGGCTGTTCAATTACTTCCGCTACTTCAGGCTT
CTCTTCTACTGGATCCTCGATTTCGGCTGTCGCTTCAGGTTCTATTTTAGGTTTTATATC
TGGTTCACCAAGTTCTTCTTGGGATTTCTTCTCATCTTCCAGTATTTCATCAACCGACTG
CTCCCAATCTTCAAGATCATCATTATTTGGAATACCGTCATCAAATTGTTCATCACGGTT
TGTGTCTGTATATTCATTAGCATGTTCATTGTCATTGTCATTATCATTGTCGTTGTCATT
ATCATTTTCATAATCTTGTCCTTCATGATCGGAAGATGTCTTGCGTCTCTTCCAGTTACC
AGATTGATCGTTGCGTTCAGAAGGACGTTTCCCATTTGAATTCTCAGTGGATTGAGTTCC
CGCTGGTTTGTGTCCAGTCTTCTCAGAAAGCATCTTCAGGAAGAAAACGTGATGTCTCCA
GGTTCTCAAGTGCACATCAGCAGTTTCCTGCGAATCGAGGAGTTTCTTGCACAGCTTGCA
TTGTATGCAGCGGAACTCAGTCAAGAACGATTGACCAACACCACGTTCCGTACTGTAACT
TGGGAACATATCCTGAGTGACATAGCTGAGATCATCATCTTCTTTGAAGTCCAGGATGAC
CTTTTCATCATCAACAGGTTTACTATCAGCCTTCTCACTCACATCTTTCATCTCTTGATC
TTCATTTTCAATCTTAGCTTTGTTTTCAGTGTCAGTTTGCTGTTCATCAGTTTTATCATT
GTCATCATGCTTCTCTTCTTGAACATCATCTCTGCGTGGTCTACGCTGACGACGCTCACA
CAGGTATGACTGCTCCATGCCCAAAGTTGAAATCATCAACATTTCAGGCTTGGGCTTTGA
AAGTACATCTTGTTTATCCTGAATTGCACGCAAATGTTCAGCAGTGAGACGGTGTTCATC
TAATTCAATTCTAGTTGGCAACTCCTTGTGGCAAGTATTACAGAAGGGATGTAGGTATTT
CTTAAGCTTCCGGTGTCCAACGGTAGTCCGGTGAGCTGCTCCGTTGGCCGCATACATATC
ACACATAGCACAGTAGAAGTCTCTAGCTGGTTGCTGACCAGATTTGCGGGTGCGTTTCAT
TTCACGAATCTTATATTCTTGTCTCATTGTATCAGCAGTAAGAGCATAGCTCTCAACAGT
CTTCTGCATCATAATGGCATGAGCTCTTCCACTGAGATGATTCTCAAATGAACGTCCATC
CCACATGCTCTTGTGGCAGATGTGACATTTCAGCAGCTTTGAATTAATGTCATCATAGCG
CGTTTTAGGGACATCTTGCTTTTCATCCTCTTCTGGCTCTTTTCTCTCATTTTCAGGTTT
GTCAGTCTCAGTAGTCTTCTCTTCCTGTTCACTGTGAATAACTAAGTTTGTAAATGCATG
AAAACATTCACTATATAATTGTATGTTGTCACTTCTGCACTTATCACACCACAATTTGAT
TCAGTGAGTATGATTAGGAGCTAAGCTTTTAATAGATTTTTAATGGGAAGATTTATGA
(3298 bp)

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