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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25558_c6_seq19
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_zinc_finger_protein_on_ecdysone_puffs_isoform_X2_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003727 F single-stranded RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005875 C microtubule associated complex
GO:0019233 P sensory perception of pain
GO:0046872 F metal ion binding
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:0.00 TPM:0.00
ORF Entry
Sequence
(Nucleotide)
ATAATGCATTTGCTATTGCATTTTTTTATTATAATATATTGGTTGTCTGTTTTCATAGAT
ACAATTAATACTACTTATACAGGTTTGTTTGCATGTTTATTATTGTCAATACATTATTTA
TGATACATCAAATACTTTATACAGTCTACTTGAAATGTCTGAAACGATATGATGACAATA
ATTTTGTGATTTCACTCTGATATCCTGACCGGTATCAACAGGAGACAATATAAACGAAAT
ACCACTGATATTTTCCGTAGTAGAAAACCGTATGTGACTTGTTTATGAAATTCTAGCAAA
AAATTCAAAAAAACTTTTTGGAAGTAATATTCCTAAGTTTGAAATTGATTGTTAGTTCGA
CTCCCTAATGTATGTGTTTATTCGTTCGCGATTCCACATATTTTTTTAATAAAAAAGCAA
CATCATTAATTTATTGTAGTTCGTAAAGCACTTTGTTACGTTTTTCTTTTTTTCATTTTA
CAAAATATGAAATCGTAGCACATATAAATTAGCGTGGACAGAAAAGGGTAATTTAACAAA
ATATAAAACTTTTATGTTTGAGCTAACAATCTTCAAAAGGCTTCAAAGGCAAATACATAC
AATAAGAGAAGAAAAACAAACACTAAATTATGGACATGGCAAACTGAAATTATAATTGAA
AGACTAAGACACAATAAAAAATCCGTATCGCACTTCTAAATACATATTCTTACAACTTTT
ACATTGTAACTATTCTCATCTACAGTAATCAGTGGTTTAAAAACTAGCAACTTTTTTACG
CAGCAAAACCTACAAGATTTTGTATCACATTCAATTCTAAATGGTAATAATTGACATGAA
GATACTAAAATGTTACCGTAGATTGGGGGAATCGGGACTCTTTCCAAATCCAACTCAAAT
TTTCAATGGTTTTTCTTAAACTAATAAAATTGAGATTAAAATAGTTCCGGAAGTTTAAAT
TTTCATATACAATGCATTATTATATATAGTTCATTGCAAAATATACACAAAAATAAAATA
AAACTATTGGGCCACATATGGAGACAATAGCTTTTCGATAGGGCTGGTGAGTACTGGCAC
TGTTTAGTTGTTTAGGTAGGTACAAACTATTTATCTGAATAGATCCAAACTTCGCTTGAC
AGAAATTTCAAATAGTAACAAAGATAATTAAATCGTTTTTAATACATTTTGTAGCTTTCC
AATCCTATTGACAAATGATCGTTTTTTCTTAAATTGATAGTGACAAGATGTCTGAGTTTT
GCTAGATTATAGAAAAAATATTGCCTTCAATTTAAAATTGGACCATTCAGTTCACCACAA
AATTAATGCCCACTATGCCTGTAAAGAAAATCTCAGATTTGTCTTTATTCTACCCAGAGT
CCTTATTCCCTCCAATCTATGGTACTCTTACTTGAAATTTTATTGATATTTTCAAGCTGT
TTTAGATGGTTCACTATCATTTTAGTTGGTGTAATATGCTTAAACAACTTCTAATATAAT
TTTATGTTATAAATATCAATTGACTGAGATCTAACATTCTCAATTCAATCCAAGTGATAA
AACGCTAAAAATAAGTAAGTAAAAAAATGATTTTATCTAATTACTAATGGAGTAACTTGG
ATTAATATTATGTAACATAATAACGGAGATAAAATTGATTTAATTTTACTTGACAGTGGC
TGTTTCTTTGTTGGTCGAATTTTAAAGTAAGTAACTTAAAACAAAGAGTAAAAGTAAAAA
TCAATTTGATTTCCATTATTACATGCAAAGATACTGAAATTATAATTATTTAAATATTGA
GAATTTTCATACTTAAATAACACATGCAAGGAATACATTATGTCCTGTAACTTACAGCTG
TCTTTTTAAGTTAAATCTTTTGAAACTCTCATTCCATTTAGTTTAGTAAACTTAAATATT
TTAGGAGACAAACAGAAACCTTCACATCACAATATAAATATTTTGTGTATGTTATTAGAT
TAGATAGTTGGTGAAACTTCATGAGCGAAAATTTTACCACAATACAGTAATGTAAATAAA
ATGTAATCAAAATAAGAATAGGATTTGCTGATGGAACACAATTTGAAAGAGATTTTTTTG
TGGATTTCCATAATTCATCAACATAGGATTTCATTTATAGATTATTTACAGATATTATTT
TGGATAATTAATTTGGTAGAAAGTCAATCCTGTCCTTATTTCGCTTGCATTGTAAATATT
TTTATCCAAAGCAGTAATTTCGGTTGCTTGTAACTAGCAAGTTCTGGGACAACATACACT
TGTTCTAATATCTGCCACGGCCCCTGCCTCTACCGCGTGCTCTAGCTCTCGGTGAGGGTT
TCGGTTTCACATCTGGCACGGGTAGAGTTAATTGAGGACTTTTTTCTTTTTCTGGGGGCT
GTTCAATTACTTCCGCTACTTCAGGCTTCTCTTCTACTGGATCCTCGATTTCGGCTGTCG
CTTCAGGTTCTATTTTAGGTTTTATATCTGGTTCACCAAGTTCTTCTTGGGATTTCTTCT
CATCTTCCAGTATTTCATCAACCGACTGCTCCCAATCTTCAAGATCATCATTATTTGGAA
TACCGTCATCAAATTGTTCATCACGGTTTGTGTCTGTATATTCATTAGCATGTTCATTGT
CATTGTCATTATCATTGTCGTTGTCATTATCATTTTCATAATCTTGTCCTTCATGATCGG
AAGATGTCTTGCGTCTCTTCCAGTTACCAGATTGATCGTTGCGTTCAGAAGGACGTTTCC
CATTTGAATTCTCAGTGGATTGAGTTCCCGCTGGTTTGTGTCCAGTCTTCTCAGAAAGCA
TCTTCAGGAAGAAAACGTGATGTCTCCAGGTTCTCAAGTGCACATCAGCAGTTTCCTGCG
AATCGAGGAGTTTCTTGCACAGCTTGCATTGTATGCAGCGGAACTCAGTCAAGAACGATT
GACCAACACCACGTTCCGTACTGTAACTTGGGAACATATCCTGAGTGACATAGCTGAGAT
CATCATCTTCTTTGAAGTCCAGGATGACCTTTTCATCATCAACAGGTTTACTATCAGCCT
TCTCACTCACATCTTTCATCTCTTGATCTTCATTTTCAATCTTAGCTTTGTTTTCAGTGT
CAGTTTGCTGTTCATCAGTTTTATCATTGTCATCATGCTTCTCTTCTTGAACATCATCTC
TGCGTGGTCTACGCTGACGACGCTCACACAGGTATGACTGCTCCATGCCCAAAGTTGAAA
TCATCAACATTTCAGGCTTGGGCTTTGAAAGTACATCTTGTTTATCCTGAATTGCACGCA
AATGTTCAGCAGTGAGACGGTGTTCATCTAATTCAATTCTAGTTGGCAACTCCTTGTGGC
AAGTATTACAGAAGGGATGTAGGTATTTCTTAAGCTTCCGGTGTCCAACGGTAGTCCGGT
GAGCTGCTCCGTTGGCCGCATACATATCACACATAGCACAGTAGAAGTCTCTAGCTGGTT
GCTGACCAGATTTGCGGGTGCGTTTCATTTCACGAATCTTATATTCTTGTCTCATTGTAT
CAGCAGTAAGAGCATAGCTCTCAACAGTCTTCTGCATCATAATGGCATGAGCTCTTCCAC
TGAGATGATTCTCAAATGAACGTCCATCCCACATGCTCTTGTGGCAGATGTGACATTTCA
GCAGCTTTGAATTAATGTCATCATAGCGCGTTTTAGGGACATCTTGCTTTTCATCCTCTT
CTGGCTCTTTTCTCTCATTTTCAGGTTTGTCAGTCTCAGTAGTCTTCTCTTCCTGTTCAC
TGTGAATAACTAAGTTTGTAAATGCATGAAAACATTCACTATATAATTGTATGTTGTCAC
TTCTGCACTTATCACACCACAATTTGATTCAGTGAGTATGATTAGGAGCTAAGCTTTTAA
TAGATTTTTAATGGGAAGATTTATGA
(3926 bp)

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